Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30e23
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 243 1e-64
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 32 0.52
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 32 0.52
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 32 0.52
Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical p... 29 4.8
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 29 4.8
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 28 8.5
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 28 8.5
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 243 bits (594), Expect = 1e-64
Identities = 113/217 (52%), Positives = 153/217 (70%), Gaps = 1/217 (0%)
Frame = +3
Query: 99 RSLSTVAPEIRIYEVGPRDGLQNESKFVPTDIKVELISKIVAAGIKNVESASFVSPKWVK 278
R+ ST R+ EVG RDGLQ E KFVPT+IKVELI ++ G + VE+ SFVSPKWV
Sbjct: 10 RAYSTAINRFRVVEVGARDGLQAEKKFVPTEIKVELIDRLSECGFQTVETTSFVSPKWVP 69
Query: 279 QMSDSVDVMKNIQRVPGVNYPVLVPNLKGYETAKQCNV-EEIAIFPAGSEGFSQKNLNCS 455
Q++D +++K +R GV+YPVLVPN G + A V EEIA+F A S+ FS KN+N +
Sbjct: 70 QLADHNEIVKKHRRFEGVSYPVLVPNAAGLKNALATGVVEEIAVFGAASDAFSLKNVNSN 129
Query: 456 VEEGLRRFKQVADEAVRDGLRVRGYISCVVGCPYDGPIHPKNIAKITEQLIAMGCYEVSL 635
VE+ L++ +V A+ + +RVRGY+S VVGCPY G + P+ +A++ E+L+ GCYEVSL
Sbjct: 130 VEDSLKKLMEVTKIALENNIRVRGYVSVVVGCPYQGAVQPEMVARVAEKLLESGCYEVSL 189
Query: 636 GDTIGVGTAGSVRRLLHEILTVAKPEQLALHFHDTYG 746
GDTIGVGT +V ++L +L E+LA+HFHDTYG
Sbjct: 190 GDTIGVGTVKTVSKMLDTVLKSVPAEKLAVHFHDTYG 226
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 701 DSEDFMKKSADGAGRAYSNRITKRYFITAHRNQLFCYLSNIFRVNRSIVGTTNNT*NISP 522
DS+ +++ G GR+YS + KR F RN + + +VNR + T +I+
Sbjct: 448 DSQPTSSQTSSGDGRSYSIKGQKR-FRNLSRNYSTKHHRKVVKVNRGNSRNNSRTASITN 506
Query: 521 YS-QAVTNGLVRDLFKSSKTFFHR 453
S A+ ++R + + S F R
Sbjct: 507 QSDDALIPAIIRTISRKSPRLFRR 530
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 701 DSEDFMKKSADGAGRAYSNRITKRYFITAHRNQLFCYLSNIFRVNRSIVGTTNNT*NISP 522
DS+ +++ G GR+YS + KR F RN + + +VNR + T +I+
Sbjct: 313 DSQPTSSQTSSGDGRSYSIKGQKR-FRNLSRNYSTKHHRKVVKVNRGNSRNNSRTASITN 371
Query: 521 YS-QAVTNGLVRDLFKSSKTFFHR 453
S A+ ++R + + S F R
Sbjct: 372 QSDDALIPAIIRTISRKSPRLFRR 395
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 701 DSEDFMKKSADGAGRAYSNRITKRYFITAHRNQLFCYLSNIFRVNRSIVGTTNNT*NISP 522
DS+ +++ G GR+YS + KR F RN + + +VNR + T +I+
Sbjct: 313 DSQPTSSQTSSGDGRSYSIKGQKR-FRNLSRNYSTKHHRKVVKVNRGNSRNNSRTASITN 371
Query: 521 YS-QAVTNGLVRDLFKSSKTFFHR 453
S A+ ++R + + S F R
Sbjct: 372 QSDDALIPAIIRTISRKSPRLFRR 395
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 701 DSEDFMKKSADGAGRAYSNRITKRYFITAHRNQLFCYLSNIFRVNRSIVGTTNNT*NISP 522
DS+ +++ G GR+YS + KR F RN + + +VNR + T +I+
Sbjct: 448 DSQPTSSQTSSGDGRSYSIKGQKR-FRNLSRNYSTKHHRKVVKVNRGNSRNNSRTASITN 506
Query: 521 YS-QAVTNGLVRDLFKSSKTFFHR 453
S A+ ++R + + S F R
Sbjct: 507 QSDDALIPAIIRTISRKSPRLFRR 530
>Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical
protein R07B5.5 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 287 THLFNPFWTDKTCRFYIFYTCSNDFTNEFNFNVCWNKLRFILKAI 153
T+ P +C FY++Y S D+ N F +C K+ +A+
Sbjct: 248 TYAVIPGLVSYSCNFYVYYWRSTDYRNAFIKQLCCGKVLTTQEAV 292
>Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.9 protein.
Length = 394
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -2
Query: 338 VIHSRHSLNIFHNINTVTHLFNPF 267
V+ + ++N+++ NT+++LFNPF
Sbjct: 60 VVDNSKNMNLYNVYNTISNLFNPF 83
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 701 DSEDFMKKSADGAGRAYSNRITKRYFITAHRNQLFCYLSNIFRVNRSIVGTTNN 540
D +M S DG +YSN I Y I FCY+S + + R+ NN
Sbjct: 157 DIMSYMFLSIDGV-YSYSNAILLVYNIFCTLLSTFCYVSVLISIRRANKNVVNN 209
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 123 EIRIYEVGPRDGLQNESKFVPTDIKVELISKIVAAGIKNVE 245
+IR+ + G DG++N K + +E+I K G+ ++E
Sbjct: 186 DIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLE 226
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 123 EIRIYEVGPRDGLQNESKFVPTDIKVELISKIVAAGIKNVE 245
+IR+ + G DG++N K + +E+I K G+ ++E
Sbjct: 186 DIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLE 226
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 547 PTTHEIYPLTRKPSRTASSATCLNLLRPSSTEQFRFFCENPSEPAGNIAISSTLHCLAVS 368
PTT + + + + +S+ RP ST F + P+ P G+ I++T+ V+
Sbjct: 1380 PTTRQTEHIDNEVTALITSSLAPQKTRPKSTPHFTVYPVRPTTPMGD-TITTTMQAATVT 1438
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 411 PAGSEGFSQKNLNCSVEEGLRRFKQVADEAVRD 509
P G FS K E+GL + +VADE V D
Sbjct: 70 PTGLRHFSTKVCEKVKEKGLTNYNEVADELVAD 102
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 411 PAGSEGFSQKNLNCSVEEGLRRFKQVADEAVRD 509
P G FS K E+GL + +VADE V D
Sbjct: 70 PTGLRHFSTKVCEKVKEKGLTNYNEVADELVAD 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,542,455
Number of Sequences: 27780
Number of extensions: 384634
Number of successful extensions: 1110
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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