Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30e17
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-432|AAF51238.1|  142|Drosophila melanogaster CG3214-PA ...   208   4e-54
AY118779-1|AAM50639.1|  127|Drosophila melanogaster GH12382p pro...   195   4e-50
AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB...    44   1e-04
AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-P...    33   0.34 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   5.6  
AL021728-4|CAA16819.1|  695|Drosophila melanogaster EG:95B7.4,FB...    28   9.8  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    28   9.8  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    28   9.8  

>AE014134-432|AAF51238.1|  142|Drosophila melanogaster CG3214-PA
           protein.
          Length = 142

 Score =  208 bits (509), Expect = 4e-54
 Identities = 84/140 (60%), Positives = 109/140 (77%)
 Frame = +2

Query: 47  LGKFLALDKLSNFFNVIRQNGGIRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRFFYS 226
           + KFL +++L+  F ++R+ GG++ +  KLYR DD+K G LVG DKYGNKY+ENP +FY 
Sbjct: 1   MAKFLGINRLTKLFQMVREAGGLKQAYLKLYRNDDLKIGTLVGIDKYGNKYFENPYYFYG 60

Query: 227 RNRWVEYSDKYYLNYDGSQVPAEWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTTA 406
           RNRW+E++    ++YDGS +PAEW+GW+HYKTDLPP +D  RP YKW+ADH+ENLSGT  
Sbjct: 61  RNRWIEFAPHVNMDYDGSMIPAEWYGWMHYKTDLPPIRDGCRPKYKWIADHSENLSGTKE 120

Query: 407 QYVPYSTTRPKVEAWEPKRK 466
            Y PYSTT  KVEAWEPK K
Sbjct: 121 AYYPYSTTPNKVEAWEPKAK 140


>AY118779-1|AAM50639.1|  127|Drosophila melanogaster GH12382p
           protein.
          Length = 127

 Score =  195 bits (476), Expect = 4e-50
 Identities = 79/125 (63%), Positives = 99/125 (79%)
 Frame = +2

Query: 92  VIRQNGGIRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRFFYSRNRWVEYSDKYYLNY 271
           ++R+ GG++ +  KLYR DD+K G LVG DKYGNKY+ENP +FY RNRW+E++    ++Y
Sbjct: 1   MVREAGGLKQAYLKLYRNDDLKIGTLVGIDKYGNKYFENPYYFYGRNRWIEFAPHVNMDY 60

Query: 272 DGSQVPAEWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTTAQYVPYSTTRPKVEAW 451
           DGS +PAEW+GW+HYKTDLPP +D  RP YKW+ADH+ENLSGT   Y PYSTT  KVEAW
Sbjct: 61  DGSMIPAEWYGWMHYKTDLPPIRDGCRPKYKWIADHSENLSGTKEAYYPYSTTPNKVEAW 120

Query: 452 EPKRK 466
           EPK K
Sbjct: 121 EPKAK 125


>AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB,
           isoform B protein.
          Length = 574

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
 Frame = +2

Query: 161 GVLVGEDKYGNKYYE---NPRFFYSR-NRWVEYSDKYYLNYDGSQVPAEWFGWLHYKTDL 328
           G  +GED +GNKYYE   NP     + +RW E +DK   +    ++ AEW  WL  + + 
Sbjct: 452 GDYIGEDYFGNKYYEIPANPSIGKRKPSRWFEPADKEAFD---QELTAEWEAWLRGRREE 508

Query: 329 PPHQDPSRPHYKWMADHTENLSGTTAQY 412
           PP ++    + + M     N +   A Y
Sbjct: 509 PPTREELVKNLQIMDMKKRNAAELEATY 536


>AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-PA
           protein.
          Length = 1506

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = -2

Query: 380 CGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFH-HSSSNTCPSTRPICSCCKRNVGS 204
           C P +   G + +P    N           +   FH     + CPS R  CSC KR  GS
Sbjct: 157 CIPTTETRGGNGNPFLIGNAQTEEMQSKSPKRRRFHWERHGHRCPSRRGSCSCLKRREGS 216

Query: 203 HSICYHICLLQLEHRPL 153
                  CL Q + +P+
Sbjct: 217 SL----DCLFQADGQPM 229


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -2

Query: 398  CQKDFRCGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRPICS 228
            CQ+D +C   S CS     P    NR C      +Q        S+++CP  +  CS
Sbjct: 2561 CQQDGQCAQGSICSHGICSPLCSTNRDCISEQLCLQGVCQGTCKSNSSCPQFQ-FCS 2616



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 22/79 (27%), Positives = 28/79 (35%)
 Frame = -2

Query: 401  SCQKDFRCGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRPICSCC 222
            SC+ +F   P   CS     P  +  R   V        P   +S        RP+CSC 
Sbjct: 9498 SCEANFEGDPFVACS-----PIQDPGRDIPVPKNPCVPSPCGPNSICQI-KQNRPVCSCV 9551

Query: 221  KRNVGSHSICYHICLLQLE 165
               +GS   C   C L  E
Sbjct: 9552 ANYIGSPPYCRPECTLSSE 9570


>AL021728-4|CAA16819.1|  695|Drosophila melanogaster
           EG:95B7.4,FBgn0000927;fs(1)Ya protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = +1

Query: 334 ASGSESSPLQVDGGPHRKSFWHDRPICAVQYDPTQSGSLGAETQRQCLKINSR*NLSCRT 513
           A   E        G H  S +H+ P    + +P Q        Q++  K+ +R  +S  T
Sbjct: 236 AKPKEPITFNASTGGHVSSIYHEEPSPTPESNPVQQQQQQQPLQQRAWKMGARNKMSAAT 295

Query: 514 P 516
           P
Sbjct: 296 P 296


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
 Frame = +2

Query: 221  YSRNRWVEYSDKYYLNYDGSQVPAEW--FGWLHY-----KTDLPPHQDPSRPHYKWMADH 379
            ++RN W++++ K+      S+V A++  F  L Y     K+ +  H++    H K + DH
Sbjct: 1461 FARNMWIKFNLKWSDFMPESEV-ADFIKFNRLEYVENESKSPVIDHRETPEKHVKNVIDH 1519

Query: 380  TENL--SGTTAQYV 415
             E+L   GTTA  +
Sbjct: 1520 IEHLLKEGTTADCI 1533


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
 Frame = +2

Query: 221  YSRNRWVEYSDKYYLNYDGSQVPAEW--FGWLHY-----KTDLPPHQDPSRPHYKWMADH 379
            ++RN W++++ K+      S+V A++  F  L Y     K+ +  H++    H K + DH
Sbjct: 1140 FARNMWIKFNLKWSDFMPESEV-ADFIKFNRLEYVENESKSPVIDHRETPEKHVKNVIDH 1198

Query: 380  TENL--SGTTAQYV 415
             E+L   GTTA  +
Sbjct: 1199 IEHLLKEGTTADCI 1212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,431,128
Number of Sequences: 53049
Number of extensions: 761672
Number of successful extensions: 2198
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)