Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30e17
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical ... 151 4e-37
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 31 0.96
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81510-5|CAB04165.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 28 6.8
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical pr... 27 8.9
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 8.9
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 8.9
L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical pr... 27 8.9
L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY241927-1|AAO85276.1| 330|Caenorhabditis elegans beta-1,3-gala... 27 8.9
AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vul... 27 8.9
>AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical
protein Y94H6A.8 protein.
Length = 187
Score = 151 bits (366), Expect = 4e-37
Identities = 67/144 (46%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
Frame = +2
Query: 38 KMSLGKFLALDKLSNFFNVIRQNGGIRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRF 217
+MSL +L +DK+ F ++++ GG++A L K Y D + G LVG D +GN+YYEN +
Sbjct: 41 QMSLKAWLGIDKIQKFGQMVKEIGGVKAVLKKRYLMDATRVGTLVGSDNFGNRYYENNAY 100
Query: 218 FYSRNRWVEYSDKYYLNYDGSQVPAEWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLS- 394
F RNRWVE+ DK +L+YD +QVP EW WLH+ TD P P P W+ +H EN S
Sbjct: 101 FVPRNRWVEFPDKVWLDYDATQVPPEWHSWLHHITDDAPSVKPP-PTQDWVLEHKENTSI 159
Query: 395 GTTAQYVPYSTTRPKVEAWEPKRK 466
+YVPYSTTR K++ W+P K
Sbjct: 160 YADKKYVPYSTTRTKIQGWQPGEK 183
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 30.7 bits (66), Expect = 0.96
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -2
Query: 383 RCGPPSTCSGDDSDPDAEANRFCSVANQTIQREPD---FHHSSSNTCPSTRPICSCCKRN 213
RC S C + SD D+++ A TI+ P+ H S N + +C CCK +
Sbjct: 397 RCHQDSECRVESSDSDSDSLNQDEHAVHTIEENPNTKSSHPKSEN--QRFQDVCQCCK-S 453
Query: 212 VGSHS 198
VG S
Sbjct: 454 VGHKS 458
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 461 VSAPRLPLWVGSYCTAHIGRSCQKDFRCGPPSTCSG-DDSDPDAEANRFCSVANQTIQRE 285
V+ R L + CT +GR KD R + C D DP+ E + + A T +E
Sbjct: 285 VNNRRKALIMAGRCTRCLGRHSFKDCRSAKFNVCMYCKDEDPNVELHNYGLCAKPTPSQE 344
Query: 284 PD 279
P+
Sbjct: 345 PE 346
>Z81510-5|CAB04165.1| 188|Caenorhabditis elegans Hypothetical
protein F21D9.8 protein.
Length = 188
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = -2
Query: 335 AEANRFCSVANQTIQREPDFHHSSSNTCPSTRPICSCCKRNVGSHSICYH 186
AEA C + D+HH CP + CS C N YH
Sbjct: 117 AEALSMCKHCLTVGVTDDDWHHEG---CPKAKDTCSVCANNTNRVGCKYH 163
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 380 CGPPSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRP 237
CG P S DDSD A + SVA T EP SSS++ S+ P
Sbjct: 673 CGLPHISSNDDSDSRFPAFKSSSVAMLT---EPYKSSSSSSSSTSSIP 717
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 278 FHHSSSNTCPSTRPI-C-SCCKRNVGSHSICYHICLLQLEHRPLH 150
FH S + + P C SC K SH + H L+H PLH
Sbjct: 34 FHVDSEHIIRGSSPAKCKSCIKWFNSSHRLLLHFHTAHLDHTPLH 78
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -2
Query: 302 QTIQREP-DFHHSSSNTCPSTRPICSCCKRNVGSHSICYHICLLQLEHRPLHRP 144
++ Q++P F S CP +P C+C N + I I Q + P
Sbjct: 163 RSAQQQPLRFSQYPSCPCPQNQPACTCSTNNQQNEQILVSISCCQQQETTTQAP 216
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 279 VRFPLNGLVGYTTKPICLRIRIRVVPTTSGW 371
+ FP NG + PI I +RV T GW
Sbjct: 171 IMFPGNGFCSHVAYPIYGSIMLRVTDTMFGW 201
>Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical
protein T14G8.2 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 203 ENPRFFYSRNRWVEYSDKYYLNY--DGSQVPAEWFGWLHYKT 322
+NP + S V ++K+ +N+ D SQ+ + F WL YKT
Sbjct: 32 DNPLLYNSIREHVN-TEKFTVNFYTDQSQLKIKGFTWLFYKT 72
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 182 KYGNKYYENPRFFYSRNRWVEYSDKYYLNYDGSQVPAEW 298
KYGN+ + P Y+ R S + D +PA+W
Sbjct: 273 KYGNRGHNQPCTHYATGRCYITSQNHGYAVDPDSLPADW 311
>Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical
protein F10F2.3 protein.
Length = 325
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 479 FKHCLCVSAPRLPLWVGSYCTAHIGRSCQKDFRCG 375
F C+C A +P W + + G +CQ CG
Sbjct: 203 FGLCVCQLAQTVPAWCNALDGLYPGYTCQDQLWCG 237
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 314 YKTDLPPHQDPSRPHYKWMADHTENLSGTTAQYVPYSTTRPKVE 445
Y+T P P ++ A T + G + Y P+ TTRP +
Sbjct: 1114 YRTHRDSDYRPMSPTSRYTAAVTRDDRGKSTSYDPHETTRPSYD 1157
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 314 YKTDLPPHQDPSRPHYKWMADHTENLSGTTAQYVPYSTTRPKVE 445
Y+T P P ++ A T + G + Y P+ TTRP +
Sbjct: 1155 YRTHRDSDYRPMSPTSRYTAAVTRDDRGKSTSYDPHETTRPSYD 1198
>L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical
protein C02F5.6a protein.
Length = 419
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 293 EWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTT 403
E+ WL + PH PHY M ENLSG +
Sbjct: 276 EFSNWLEELSIRFPHYQIDPPHYIGMTRGYENLSGAS 312
>L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical
protein C02F5.6b protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 293 EWFGWLHYKTDLPPHQDPSRPHYKWMADHTENLSGTT 403
E+ WL + PH PHY M ENLSG +
Sbjct: 276 EFSNWLEELSIRFPHYQIDPPHYIGMTRGYENLSGAS 312
>AY241927-1|AAO85276.1| 330|Caenorhabditis elegans
beta-1,3-galactosyltransferase protein.
Length = 330
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 113 IRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRF 217
I A L++ YR +DV G +G KY +PRF
Sbjct: 229 INAQLFRHYRNEDVSVGAWIG--GLDVKYVHDPRF 261
>AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vulva
protein 2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 113 IRASLYKLYRQDDVKDGVLVGEDKYGNKYYENPRF 217
I A L++ YR +DV G +G KY +PRF
Sbjct: 229 INAQLFRHYRNEDVSVGAWIG--GLDVKYVHDPRF 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,508,932
Number of Sequences: 27780
Number of extensions: 402689
Number of successful extensions: 1046
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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