Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30e15
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15841-1|AAA36796.1| 225|Homo sapiens protein ( Human U2 small ... 173 4e-43
BC036737-1|AAH36737.1| 225|Homo sapiens small nuclear ribonucle... 173 4e-43
BC018022-1|AAH18022.1| 225|Homo sapiens small nuclear ribonucle... 173 4e-43
AL034428-1|CAB38777.2| 225|Homo sapiens small nuclear ribonucle... 173 4e-43
X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for ... 148 2e-35
M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein... 148 2e-35
BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear ribonucle... 148 2e-35
BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear ribonucle... 148 2e-35
BC008311-1|AAH08311.1| 109|Homo sapiens Similar to small nuclea... 143 6e-34
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 40 0.006
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 40 0.006
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 40 0.006
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 40 0.006
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 40 0.006
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 40 0.006
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 40 0.008
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 40 0.008
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 40 0.008
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 40 0.008
BX322653-1|CAH72167.1| 517|Homo sapiens novel protein protein. 39 0.014
BC010697-1|AAH10697.2| 517|Homo sapiens RNA-binding region (RNP... 39 0.014
AY099329-1|AAM45139.1| 517|Homo sapiens RNA recognition protein... 39 0.014
AK057799-1|BAB71580.1| 517|Homo sapiens protein ( Homo sapiens ... 39 0.014
AB058742-1|BAB47468.1| 541|Homo sapiens KIAA1839 protein protein. 39 0.014
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 38 0.033
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 38 0.043
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 35 0.23
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 35 0.23
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 35 0.23
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 35 0.23
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 35 0.23
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 35 0.23
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 35 0.23
BC006986-1|AAH06986.1| 413|Homo sapiens RNA binding motif prote... 35 0.30
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 33 0.93
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 33 0.93
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 33 0.93
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 33 0.93
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 33 1.2
AL390039-3|CAI41564.1| 413|Homo sapiens novel protein protein. 33 1.2
AL390039-2|CAC19636.1| 405|Homo sapiens novel protein protein. 33 1.2
AK001878-1|BAA91957.1| 405|Homo sapiens protein ( Homo sapiens ... 33 1.2
X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein... 32 1.6
X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract bin... 32 1.6
X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract bin... 32 1.6
X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract bin... 32 1.6
X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-bind... 32 1.6
BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract bi... 32 1.6
BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract bi... 32 1.6
BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract bi... 32 1.6
BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract bi... 32 1.6
AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein. 32 1.6
AB208910-1|BAD92147.1| 329|Homo sapiens polypyrimidine tract-bi... 32 1.6
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 31 3.7
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 31 3.7
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 31 3.7
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 31 3.7
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 31 3.7
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 31 3.7
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 31 4.9
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 31 4.9
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 31 4.9
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 31 4.9
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 31 4.9
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 31 4.9
BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein. 31 4.9
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 31 4.9
BC039896-1|AAH39896.1| 618|Homo sapiens Similar to ROD1 regulat... 31 4.9
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 31 4.9
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 31 4.9
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 31 4.9
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 31 4.9
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 31 4.9
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 31 4.9
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 31 4.9
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 31 4.9
AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of diffe... 31 4.9
AL158824-9|CAI12354.1| 457|Homo sapiens ROD1 regulator of diffe... 31 4.9
AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of diffe... 31 4.9
AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of diffe... 31 4.9
AB208812-1|BAD92049.1| 338|Homo sapiens H2.0-like homeo box 1 v... 31 4.9
AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein. 31 4.9
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 30 8.6
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 30 8.6
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 30 8.6
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 30 8.6
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 30 8.6
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 30 8.6
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 30 8.6
AL365412-1|CAB96956.1| 144|Homo sapiens hypothetical protein, s... 30 8.6
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 30 8.6
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 30 8.6
>M15841-1|AAA36796.1| 225|Homo sapiens protein ( Human U2 small
nuclear RNA-associated B'' antigen mRNA, complete cds.
).
Length = 225
Score = 173 bits (422), Expect = 4e-43
Identities = 92/174 (52%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
S+T ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK--KEKKKAKTVEQTAT 118
Query: 531 XXSRLIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFN 674
++ G G P G N + PPN ILFL NLP+ET+EMMLSMLFN
Sbjct: 119 TTNKKPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFN 172
>BC036737-1|AAH36737.1| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 173 bits (422), Expect = 4e-43
Identities = 92/174 (52%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
S+T ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK--KEKKKAKTVEQTAT 118
Query: 531 XXSRLIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFN 674
++ G G P G N + PPN ILFL NLP+ET+EMMLSMLFN
Sbjct: 119 TTNKKPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFN 172
>BC018022-1|AAH18022.1| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 173 bits (422), Expect = 4e-43
Identities = 92/174 (52%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
S+T ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK--KEKKKAKTVEQTAT 118
Query: 531 XXSRLIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFN 674
++ G G P G N + PPN ILFL NLP+ET+EMMLSMLFN
Sbjct: 119 TTNKKPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFN 172
>AL034428-1|CAB38777.2| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 173 bits (422), Expect = 4e-43
Identities = 92/174 (52%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
S+T ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK--KEKKKAKTVEQTAT 118
Query: 531 XXSRLIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFN 674
++ G G P G N + PPN ILFL NLP+ET+EMMLSMLFN
Sbjct: 119 TTNKKPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFN 172
>X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for U1
small nuclear RNP-specific A protein. ).
Length = 282
Score = 148 bits (358), Expect = 2e-35
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +3
Query: 174 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 353
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 354 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 482
AT ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 65 ATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
Score = 52.4 bits (120), Expect = 1e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3
Query: 591 AEQPPNQILFLTNLPDETSEMMLSMLFN 674
+E PPN ILFLTNLP+ET+E+MLSMLFN
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFN 229
>M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein A
protein.
Length = 282
Score = 148 bits (358), Expect = 2e-35
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +3
Query: 174 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 353
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 354 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 482
AT ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 65 ATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
Score = 52.4 bits (120), Expect = 1e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3
Query: 591 AEQPPNQILFLTNLPDETSEMMLSMLFN 674
+E PPN ILFLTNLP+ET+E+MLSMLFN
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFN 229
>BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear
ribonucleoprotein polypeptide A protein.
Length = 282
Score = 148 bits (358), Expect = 2e-35
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +3
Query: 174 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 353
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 354 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 482
AT ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 65 ATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
Score = 52.4 bits (120), Expect = 1e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3
Query: 591 AEQPPNQILFLTNLPDETSEMMLSMLFN 674
+E PPN ILFLTNLP+ET+E+MLSMLFN
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFN 229
>BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear
ribonucleoprotein polypeptide A protein.
Length = 282
Score = 148 bits (358), Expect = 2e-35
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +3
Query: 174 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 353
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 354 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 482
AT ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 65 ATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
Score = 52.4 bits (120), Expect = 1e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3
Query: 591 AEQPPNQILFLTNLPDETSEMMLSMLFN 674
+E PPN ILFLTNLP+ET+E+MLSMLFN
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFN 229
>BC008311-1|AAH08311.1| 109|Homo sapiens Similar to small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 109
Score = 143 bits (346), Expect = 6e-34
Identities = 66/104 (63%), Positives = 80/104 (76%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 482
S+T ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK 104
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 417 YSKIDSD 437
+ SD
Sbjct: 81 QAGKSSD 87
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I +IV MK T + +G F+ F + A AL + GF +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I +IV MK T + +G F+ F + A AL + GF +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I +IV MK T + +G F+ F + A AL + GF +PMR+
Sbjct: 245 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I +IV MK T + +G F+ F + A AL + GF +PMR+
Sbjct: 257 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 314
>BX322653-1|CAH72167.1| 517|Homo sapiens novel protein protein.
Length = 517
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502
>BC010697-1|AAH10697.2| 517|Homo sapiens RNA-binding region (RNP1,
RRM) containing 3 protein.
Length = 517
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502
>AY099329-1|AAM45139.1| 517|Homo sapiens RNA recognition protein
protein.
Length = 517
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502
>AK057799-1|BAB71580.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ25070 fis, clone CBL05164. ).
Length = 517
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502
>AB058742-1|BAB47468.1| 541|Homo sapiens KIAA1839 protein protein.
Length = 541
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 467 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 526
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 37.5 bits (83), Expect = 0.043
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I +IV MK T + +G + F + A AL + GF +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLNGFELAGRPMRV 320
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 109 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 244 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 413
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>BC006986-1|AAH06986.1| 413|Homo sapiens RNA binding motif protein
41 protein.
Length = 413
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 297 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
M T +MRGQAF+ F A AL + G+ Y K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 386
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.93
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 26 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 33.1 bits (72), Expect = 0.93
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 26 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.93
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 26 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 33.1 bits (72), Expect = 0.93
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 32 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 90
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 26 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIRLYGRPIKIQF 84
>AL390039-3|CAI41564.1| 413|Homo sapiens novel protein protein.
Length = 413
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 297 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
M T +MRGQAF+ F A AL + G+ + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386
>AL390039-2|CAC19636.1| 405|Homo sapiens novel protein protein.
Length = 405
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 297 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
M T +MRGQAF+ F A AL + G+ + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386
>AK001878-1|BAA91957.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ11016 fis, clone PLACE1003334. ).
Length = 405
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 297 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 425
M T +MRGQAF+ F A AL + G+ + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386
>X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein
protein.
Length = 557
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract
binding protein protein.
Length = 557
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract
binding protein protein.
Length = 550
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract
binding protein protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-binding
protein (pPTB) protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258
Query: 423 KIDS 434
K+ S
Sbjct: 259 KLTS 262
>AB208910-1|BAD92147.1| 329|Homo sapiens polypyrimidine
tract-binding protein 1 isoform c variant protein.
Length = 329
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + SA A S+ G Y+ +RI +S
Sbjct: 217 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 275
Query: 423 KIDS 434
K+ S
Sbjct: 276 KLTS 279
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+ +FSQ+G+I++I + KT K +G F+ +++ S +A+ + G + +R+ +
Sbjct: 52 IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 17 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 64
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein.
Length = 558
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 204 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 262
Query: 423 KIDS 434
K+ S
Sbjct: 263 KLTS 266
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 SLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+LY IFS FG IL VA +G FV F++ SA A+ M G
Sbjct: 148 ALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 194
>BC039896-1|AAH39896.1| 618|Homo sapiens Similar to ROD1 regulator
of differentiation 1 (S. pombe) protein.
Length = 618
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 241 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 299
Query: 423 KIDS 434
K+ S
Sbjct: 300 KLTS 303
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 SLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+LY IFS FG IL VA +G FV F++ SA A+ M G
Sbjct: 105 ALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 151
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 SLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+LY IFS FG IL VA +G FV F++ SA A+ M G
Sbjct: 105 ALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 151
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQG 383
SL +FSQFG+ L + M+ K +G FV +++ A A+ M G
Sbjct: 206 SLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253
>AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 198 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 256
Query: 423 KIDS 434
K+ S
Sbjct: 257 KLTS 260
>AL158824-9|CAI12354.1| 457|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 103 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 161
Query: 423 KIDS 434
K+ S
Sbjct: 162 KLTS 165
>AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 524
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 170 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 228
Query: 423 KIDS 434
K+ S
Sbjct: 229 KLTS 232
>AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 198 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 256
Query: 423 KIDS 434
K+ S
Sbjct: 257 KLTS 260
>AB208812-1|BAD92049.1| 338|Homo sapiens H2.0-like homeo box 1
variant protein.
Length = 338
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Frame = -2
Query: 664 IDNIIS-----EVSSGRFVKNRIWLGGCSALTLFRIPAP--GIPC 551
ID I+S +V G ++ R W GGC LT +P P G+ C
Sbjct: 293 IDRILSAEFDPKVKEGNTLRGRSWAGGCRPLTTDPLPGPRAGLGC 337
>AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein.
Length = 521
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK--PMRIQYS 422
L+ IFS+FG +L I+ T + QA + + + +A A ++ G Y+ +RI +S
Sbjct: 167 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 225
Query: 423 KIDS 434
K+ S
Sbjct: 226 KLTS 229
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPF--YDKPMRIQY 419
SL A+ +F + I + +K A++ ++ + +A A M+GFP D+ +R+ +
Sbjct: 103 SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 162
Query: 420 SKID 431
+K +
Sbjct: 163 AKAE 166
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>AL365412-1|CAB96956.1| 144|Homo sapiens hypothetical protein,
similar to (NP_006139.1) LASP-1, LIM and SH3 domain
prote protein.
Length = 144
Score = 29.9 bits (64), Expect = 8.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 610 WLGGCSALTLFRIPAPGIPCP 548
W+G C+A + R+P P +P P
Sbjct: 43 WVGRCTAFSFLRLPFPSLPFP 63
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L +F ++G++ D+ + T + RG AFV F + A A+ +M G + +R+Q
Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88
Query: 417 YSK 425
++
Sbjct: 89 MAR 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,822,954
Number of Sequences: 237096
Number of extensions: 1726193
Number of successful extensions: 2727
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 2639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2723
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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