Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30e15
(674 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear ... 187 1e-47
L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protei... 187 1e-47
AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p pro... 187 1e-47
AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA ... 187 1e-47
BT024321-1|ABC86383.1| 407|Drosophila melanogaster IP10959p pro... 39 0.005
AE013599-3316|AAM68198.1| 407|Drosophila melanogaster CG30327-P... 38 0.009
AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p pro... 37 0.022
AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-P... 37 0.022
AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-P... 36 0.038
AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p pro... 30 2.5
AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA ... 30 2.5
BT001626-1|AAN71381.1| 562|Drosophila melanogaster RE37461p pro... 30 3.3
X15702-1|CAA33732.1| 544|Drosophila melanogaster protein ( Frui... 29 4.4
BT022170-1|AAY51564.1| 562|Drosophila melanogaster IP01303p pro... 29 4.4
BT001538-1|AAN71293.1| 248|Drosophila melanogaster RE08878p pro... 29 4.4
AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p pro... 29 4.4
AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA... 29 4.4
AE013599-187|AAM68383.1| 562|Drosophila melanogaster CG30443-PA... 29 4.4
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 29 5.8
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 29 5.8
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 29 5.8
AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p pro... 29 7.7
AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD... 29 7.7
AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF... 29 7.7
AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC... 29 7.7
AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB... 29 7.7
>M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear
ribonucleoprotein protein.
Length = 216
Score = 187 bits (456), Expect = 1e-47
Identities = 102/170 (60%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
SA+ ALR+MQGFPFYDKPM+I YSK DSDI+AK KGTF+ERPK+
Sbjct: 61 SASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDK 120
Query: 531 XXSRLIGHGIPGAGILNNVNA--EQPPNQILFLTNLPDETSEMMLSMLFN 674
P + +N NA EQPPNQILFLTNLP+ET+EMMLSMLFN
Sbjct: 121 KKK-------PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFN 163
>L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protein
protein.
Length = 216
Score = 187 bits (456), Expect = 1e-47
Identities = 102/170 (60%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
SA+ ALR+MQGFPFYDKPM+I YSK DSDI+AK KGTF+ERPK+
Sbjct: 61 SASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDK 120
Query: 531 XXSRLIGHGIPGAGILNNVNA--EQPPNQILFLTNLPDETSEMMLSMLFN 674
P + +N NA EQPPNQILFLTNLP+ET+EMMLSMLFN
Sbjct: 121 KKK-------PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFN 163
>AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p
protein.
Length = 216
Score = 187 bits (456), Expect = 1e-47
Identities = 102/170 (60%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
SA+ ALR+MQGFPFYDKPM+I YSK DSDI+AK KGTF+ERPK+
Sbjct: 61 SASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDK 120
Query: 531 XXSRLIGHGIPGAGILNNVNA--EQPPNQILFLTNLPDETSEMMLSMLFN 674
P + +N NA EQPPNQILFLTNLP+ET+EMMLSMLFN
Sbjct: 121 KKK-------PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFN 163
>AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA
protein.
Length = 216
Score = 187 bits (456), Expect = 1e-47
Identities = 102/170 (60%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +3
Query: 171 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 350
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 351 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXX 530
SA+ ALR+MQGFPFYDKPM+I YSK DSDI+AK KGTF+ERPK+
Sbjct: 61 SASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDK 120
Query: 531 XXSRLIGHGIPGAGILNNVNA--EQPPNQILFLTNLPDETSEMMLSMLFN 674
P + +N NA EQPPNQILFLTNLP+ET+EMMLSMLFN
Sbjct: 121 KKK-------PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFN 163
>BT024321-1|ABC86383.1| 407|Drosophila melanogaster IP10959p
protein.
Length = 407
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV---ALRSMQGFPFYDKPMRIQY 419
LYA ++ + LDI M+ +M+GQAFV F + ++ + AL G ++DKPM + Y
Sbjct: 345 LYAKYTAASK-LDIKVMQQGRMKGQAFVTFLDANNPEIIAQALNETNGLLWHDKPMIVCY 403
Query: 420 SK 425
K
Sbjct: 404 GK 405
>AE013599-3316|AAM68198.1| 407|Drosophila melanogaster CG30327-PA
protein.
Length = 407
Score = 38.3 bits (85), Expect = 0.009
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV---ALRSMQGFPFYDKPMRIQY 419
LYA ++ + LDI M +M+GQAFV F + ++ + AL G ++DKPM + Y
Sbjct: 345 LYAKYTAASK-LDIKVMHQGRMKGQAFVTFLDANNPEIIAQALNETNGLLWHDKPMIVCY 403
Query: 420 SK 425
K
Sbjct: 404 GK 405
>AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p
protein.
Length = 121
Score = 37.1 bits (82), Expect = 0.022
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+Y IF +FG I I T + RG AFV++++I A A + GF ++ + + Y
Sbjct: 31 MYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 87
>AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-PA
protein.
Length = 121
Score = 37.1 bits (82), Expect = 0.022
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
+Y IF +FG I I T + RG AFV++++I A A + GF ++ + + Y
Sbjct: 31 MYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 87
>AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-PA
protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.038
Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L +FSQ+G++++I + KT K +G F+ +++ S +A+ ++ G D+ +R+ +
Sbjct: 50 LVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDH 109
>AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p
protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 258 IFSQFGQILDIVAM--KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 431
+F+ FG I ++ + G A VIF+ + A A++ G P +PM IQ + D
Sbjct: 128 LFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSD 187
Query: 432 SDIIAK 449
++ +
Sbjct: 188 VAVLTR 193
>AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA
protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 258 IFSQFGQILDIVAM--KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 431
+F+ FG I ++ + G A VIF+ + A A++ G P +PM IQ + D
Sbjct: 128 LFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMTIQLAVSD 187
Query: 432 SDIIAK 449
++ +
Sbjct: 188 VAVLTR 193
>BT001626-1|AAN71381.1| 562|Drosophila melanogaster RE37461p
protein.
Length = 562
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 290 SSNENLKNAWSSICYFQGNFKCHCCFAEHARISIL 394
S N+K+A +S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNACGAEYARLFAL 476
>X15702-1|CAA33732.1| 544|Drosophila melanogaster protein (
Fruitfly LA9 mRNA forDNA binding protein. ).
Length = 544
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQI--LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+L IF +FG + +D+V K + AFV FK+ +AT AL + G
Sbjct: 357 ALEKIFKKFGDVEEIDVVCSKAVL----AFVTFKQSDAATKALAQLDG 400
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLF 671
GIP + + P NQI+F+TNLP+E L LF
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALF 195
>BT022170-1|AAY51564.1| 562|Drosophila melanogaster IP01303p
protein.
Length = 562
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 290 SSNENLKNAWSSICYFQGNFKCHCCFAEHARISIL 394
S N+K+A +S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFAL 476
>BT001538-1|AAN71293.1| 248|Drosophila melanogaster RE08878p
protein.
Length = 248
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQI--LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+L IF +FG + +D+V K + AFV FK+ +AT AL + G
Sbjct: 63 ALEKIFKKFGDVEEIDVVCSKAVL----AFVTFKQSDAATKALAQLDG 106
>AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p
protein.
Length = 542
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQI--LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+L IF +FG + +D+V K + AFV FK+ +AT AL + G
Sbjct: 357 ALEKIFKKFGDVEEIDVVCSKAVL----AFVTFKQSDAATKALAQLDG 400
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLF 671
GIP + + P NQI+F+TNLP+E L LF
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALF 195
>AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA
protein.
Length = 542
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQI--LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQG 383
+L IF +FG + +D+V K + AFV FK+ +AT AL + G
Sbjct: 357 ALEKIFKKFGDVEEIDVVCSKAVL----AFVTFKQSDAATKALAQLDG 400
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLF 671
GIP + + P NQI+F+TNLP+E L LF
Sbjct: 158 GIPKVKV-GKIPLGTPKNQIVFVTNLPNEYLHKDLVALF 195
>AE013599-187|AAM68383.1| 562|Drosophila melanogaster CG30443-PA
protein.
Length = 562
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 290 SSNENLKNAWSSICYFQGNFKCHCCFAEHARISIL 394
S N+K+A +S G F C+ C AE+AR+ L
Sbjct: 442 SGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFAL 476
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L +F + G++ DI + T + RG AFV F + A AL +M G + +R+Q
Sbjct: 39 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQM 98
Query: 420 SK 425
++
Sbjct: 99 AR 100
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L +F + G++ DI + T + RG AFV F + A AL +M G + +R+Q
Sbjct: 39 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQM 98
Query: 420 SK 425
++
Sbjct: 99 AR 100
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 249 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 419
L +F + G++ DI + T + RG AFV F + A AL +M G + +R+Q
Sbjct: 39 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQM 98
Query: 420 SK 425
++
Sbjct: 99 AR 100
>AY070612-1|AAL48083.1| 470|Drosophila melanogaster RE71384p
protein.
Length = 470
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 110 TLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN 169
Query: 417 YS 422
+S
Sbjct: 170 WS 171
>AE014297-3445|AAN13978.1| 470|Drosophila melanogaster CG5422-PD,
isoform D protein.
Length = 470
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 110 TLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN 169
Query: 417 YS 422
+S
Sbjct: 170 WS 171
>AE014297-3444|AAN13977.1| 464|Drosophila melanogaster CG5422-PF,
isoform F protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 110 TLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN 169
Query: 417 YS 422
+S
Sbjct: 170 WS 171
>AE014297-3443|AAF56224.1| 464|Drosophila melanogaster CG5422-PC,
isoform C protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 110 TLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN 169
Query: 417 YS 422
+S
Sbjct: 170 WS 171
>AE014297-3442|AAF56225.1| 464|Drosophila melanogaster CG5422-PB,
isoform B protein.
Length = 464
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 246 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 416
+L F+ FG+I + ++ T+K +G AFV F + + A A+++M G + +R
Sbjct: 110 TLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN 169
Query: 417 YS 422
+S
Sbjct: 170 WS 171
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,435,227
Number of Sequences: 53049
Number of extensions: 522845
Number of successful extensions: 1136
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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