Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30e10
(333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71267-1|CAA95851.2| 172|Caenorhabditis elegans Hypothetical pr... 33 0.050
Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical p... 29 1.1
AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl cholin... 29 1.1
Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical p... 27 2.5
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 27 3.3
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 27 3.3
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 27 3.3
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 26 5.7
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 26 5.7
U52002-5|AAB37729.2| 534|Caenorhabditis elegans Hypothetical pr... 26 5.7
U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine recept... 26 5.7
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 26 5.7
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 26 5.7
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 26 5.7
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 26 5.7
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 26 5.7
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 26 5.7
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 26 7.5
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 26 7.5
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 26 7.5
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 26 7.5
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 25 10.0
AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine re... 25 10.0
>Z71267-1|CAA95851.2| 172|Caenorhabditis elegans Hypothetical
protein W01A8.4 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.050
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 5 EFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFG 184
E+L++ +P + G D A+ R+ S +TQ E+F RT + + +
Sbjct: 67 EYLRREYDPHSFKYKEGVTMDPAMFRWYSADMTQAEFFRFTPRTVFLYVGTVFALFYIYT 126
Query: 185 TLIWNERTQREQKIRSGELRYKDR 256
L++ + + G+L + DR
Sbjct: 127 RLMFVPMDKSNEACLDGKLLWWDR 150
>Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +2
Query: 5 EFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFG 184
+FL R P ++++ + V +FE+F + F FV+ + TFG
Sbjct: 471 KFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFLIITFG 530
>Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +2
Query: 5 EFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFG 184
+FL R P ++++ + V +FE+F + F FV+ + TFG
Sbjct: 471 KFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFLIITFG 530
>AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl choline
receptor alpha subunitDES-2 protein.
Length = 548
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +2
Query: 5 EFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFG 184
+FL R P ++++ + V +FE+F + F FV+ + TFG
Sbjct: 471 KFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFLIITFG 530
>Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 113 IQTVLLSWTETFAMLCRK 60
+ T+L SWT F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235
>Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 113 IQTVLLSWTETFAMLCRK 60
+ T+L SWT F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 74 LQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQR 214
+ FL++ T+ E+ ++KR L + V F F L W+ Q+
Sbjct: 411 MNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGQQ 457
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 74 LQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQR 214
+ FL++ T+ E+ ++KR L + V F F L W+ Q+
Sbjct: 411 MNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGQQ 457
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 GVLETKNKPLEKRFGGWLCFRHSIAKVSV 90
G++ KN L+ FG LCF H+IA V
Sbjct: 30 GIVVLKNPILKNAFGA-LCFSHTIANFGV 57
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 166 YNNNKKSKQTSSLVYGKIFKLCYFHGQKPLQ 74
YNN K +K T +V G K FHG++ L+
Sbjct: 25 YNNLKINKDTKVIVQGFTGKQGTFHGKQMLE 55
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 4 GVLETKNKPLEKRFGGWLCFRHSIAKVSVHE 96
G+L+TKN + R LCF HS A ++++
Sbjct: 275 GLLKTKNSVISTRGMCELCFLHSTALEAINQ 305
>U52002-5|AAB37729.2| 534|Caenorhabditis elegans Hypothetical
protein F08B4.5 protein.
Length = 534
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +1
Query: 244 LQRQTLQASLITDELVHN 297
L++QTLQ+SLI++EL+ +
Sbjct: 56 LKKQTLQSSLISEELIRD 73
>U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine receptor
protein 3, isoformd protein.
Length = 245
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 125 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 259
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 166 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 212
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 125 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 259
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 164 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 210
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 125 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 259
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 181 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 227
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 125 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 259
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 179 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 225
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 296 LCTSSSVIKLA*RVCLCNGALHCESSVH 213
LC+S+ K R C+ N LH E S H
Sbjct: 131 LCSSNYHGKRCNRYCIANAKLHWECSTH 158
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 125 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 259
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 181 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 227
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 296 LCTSSSVIKLA*RVCLCNGALHCESSVH 213
LC+S+ K R C+ N LH E S H
Sbjct: 131 LCSSNYHGKRCNRYCIANAKLHWECSTH 158
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1136 PYMRANSRSRYNNRSDMSKTSSVIFG 1161
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1176 PYMRANSRSRYNNRSDMSKTSSVIFG 1201
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1237 PYMRANSRSRYNNRSDMSKTSSVIFG 1262
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1136 PYMRANSRSRYNNRSDMSKTSSVIFG 1161
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1176 PYMRANSRSRYNNRSDMSKTSSVIFG 1201
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1237 PYMRANSRSRYNNRSDMSKTSSVIFG 1262
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1060 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1104
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1082 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1126
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 873 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 917
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1180 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1224
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1060 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1104
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1082 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1126
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 873 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 917
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 1180 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 1224
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 891 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 935
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 98 VTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRS 232
VT + + KRT+L G F V + + W ER QR + S
Sbjct: 851 VTNSQARAILKRTNLVGTFCNVTYITSADAKTWKERFQRPSESSS 895
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 196 PYQGTKCKHGYNNNKKSKQTSSLVYG 119
PY + YNN +TSS+++G
Sbjct: 1176 PYMRANSRSRYNNRSDMSKTSSVIFG 1201
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 202 LVPYQGTKCKHGYNNNKKSKQTSSLVYGKIFKL 104
L PY C GY N+K T VY K+F +
Sbjct: 112 LFPYFTASCYQGYENDKNGFFT---VYRKVFNI 141
>AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 66 protein.
Length = 323
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 332 FFFNIIFTIYFLLCTS 285
+FF+ + IYFLLC+S
Sbjct: 6 YFFHYYWPIYFLLCSS 21
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,426,131
Number of Sequences: 27780
Number of extensions: 140106
Number of successful extensions: 514
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -