Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30e04
         (520 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.16 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.38 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.87 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   2.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   2.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   6.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.1  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 215 ASAARRLGSPARAPPPGREFSGGASIPRSLASSRQRANERS 337
           AS A  L SP++ P   R     +S  RS ++S+QRAN ++
Sbjct: 591 ASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKT 631


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
 Frame = +2

Query: 104 ESRCSE*CANCAAPASVSRAHDDASSST---SLVPGRRSTASAARR--LGSPARAPPPGR 268
           E RCS       +P    + + + SSST   S+  G  S + +A    +GSP   PPP  
Sbjct: 732 EGRCSSVSGGDWSPMGGDQQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPPP 791

Query: 269 EFSGGASIPR 298
                  +PR
Sbjct: 792 SSLSPGGVPR 801


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 137 AAPASVSRAHDDASSSTSLVPGRRSTASAARRLGSPARAPPPGREFSGGASIPRSLASS 313
           AAP   S     ASS+ +     RS  + A  L +    PPP    SG      S+ S+
Sbjct: 729 AAPHHHSLQQQHASSAFNSAGDARSGVAVAAALNTGGGGPPPDGSGSGSRCSKPSVTST 787


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 200 PEPNWWNWMRR 168
           P+  WW W RR
Sbjct: 5   PQSRWWRWRRR 15


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 295 RDTGAPGELAAGGRSPSRGAQSPGRTRCTASARNQTGGTG 176
           R   A G   +GG + +  ++S  +   T +  + TGGTG
Sbjct: 216 RGFSASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTG 255


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 295 RDTGAPGELAAGGRSPSRGAQSPGRTRCTASARNQTGGTG 176
           R   A G   +GG + +  ++S  +   T +  + TGGTG
Sbjct: 216 RGFSASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTG 255


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 295 RDTGAPGELAAGGRSPSRGAQSPGRTRCTASARNQTGGTG 176
           R   A G   +GG + +  ++S  +   T +  + TGGTG
Sbjct: 216 RGFSASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTG 255


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 295 RDTGAPGELAAGGRSPSRGAQSPGRTRCTASARNQTGGTG 176
           R   A G   +GG + +  ++S  +   T +  + TGGTG
Sbjct: 216 RGFSASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTG 255


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 167 DDASSSTSLVPGRRSTASAARRLGSPARAPPPGRE 271
           + +  ST   PG  S +  A R G    A PP +E
Sbjct: 185 EPSRGSTPPTPGDDSDSMGASRHGKTPLATPPTKE 219


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 236 GSPARAPPPGREFSGGASIPRSLASS 313
           G   + PPPG    G  SIP SLA++
Sbjct: 615 GMVPQPPPPGSAL-GHPSIPTSLAAA 639


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 412 RAQCRQPG*QPEQHIIE 462
           R QC   G  P+QHI+E
Sbjct: 230 RKQCPAVGDCPDQHIVE 246


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 203 RRSTASAARRLGSPARAPPP 262
           RRS A  A +  +P +AP P
Sbjct: 7   RRSGADGANKAAAPQQAPEP 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,468
Number of Sequences: 2352
Number of extensions: 10846
Number of successful extensions: 84
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)