Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30e02
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.3  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/60 (21%), Positives = 29/60 (48%)
 Frame = -3

Query: 571 STLSRRVGPYTSYSFCLKSLQVDL*LYRDLSPLHLAVHLSQDTLFPLCGHFQCQVLSFQD 392
           +T++  +  Y  Y F   + ++ +  +    P++LAV ++   L   CG  +  V +F +
Sbjct: 34  TTVTHILCAYLCYIFSKFACKIQIQSFSMAFPINLAVPVTVTLLLVFCGLREADVCAFDN 93


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -2

Query: 584 RQASVN--PVSPCWTLHQLFILFKVTSGRFITISGPVATTFSCASVTRHAISIMWSFSMS 411
           R++ VN  P S C T  +L   +   + R    S P+ +T +  +  R A +I+W     
Sbjct: 396 RKSRVNQEPNSGCGTQSELLRAYGNLALR--RTSTPMLSTTTTTTTNRTAETILWKDYAD 453

Query: 410 SPVIS 396
           +PV++
Sbjct: 454 APVMN 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,994
Number of Sequences: 2352
Number of extensions: 16217
Number of successful extensions: 48
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)