Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30e02
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical pr...   121   5e-28
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical
           protein C08B6.8 protein.
          Length = 193

 Score =  121 bits (292), Expect = 5e-28
 Identities = 57/120 (47%), Positives = 79/120 (65%)
 Frame = +1

Query: 367 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 546
           I QRI+W+D EMTGLD+E   + EIA +VTD++LN +ATGPDIVI+ P+  L+ M  W +
Sbjct: 11  IEQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPR 70

Query: 547 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRMFLIKVHAKI 726
               E GL E  + S  S+A+AE  ++ F+  H      P+AGNSIYMDR+F+ K   K+
Sbjct: 71  NTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKL 130


>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
            C27F2.8 protein.
          Length = 1715

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 144  FRNSMYVM*CCTTINFIFFCVMTCSYVQHVKSIS 245
            F N MY   C T + F   CV+ C+Y++  ++I+
Sbjct: 1051 FENIMYYS-CVTALIFCLVCVLACAYLEGDRAIA 1083


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 408 SCHFKIHPYNPLSYVNFSIFFHHYFRRH 325
           S H  I P  P+ Y N   ++H Y+R H
Sbjct: 94  STHVIIQPATPIIYDNHHYYWHGYYRSH 121


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 438 FHYVVIFNVKSCHFKIHPYNPLSYVNFSIFFH 343
           F  + +F+ +  + ++ PY P  Y  F +FFH
Sbjct: 161 FIILCVFSSRVKYERVDPYKPPCYYGFILFFH 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,583,532
Number of Sequences: 27780
Number of extensions: 348769
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)