Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d24
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...   320   1e-87
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...   320   1e-87
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...   320   1e-87

>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score =  320 bits (786), Expect = 1e-87
 Identities = 146/258 (56%), Positives = 193/258 (74%)
 Frame = +3

Query: 6   IKCQDKYLRDFLKTHIITDIXXXXXXXXXXXXXSTLQNFIFSMLQDSNTRAAKLSIDILV 185
           ++C DK LR FL+THI+TDI             S+LQ F++SML+D+N +AAK+S DI++
Sbjct: 126 LRCPDKNLRTFLQTHIVTDIKNMNAKHKDMKLNSSLQAFMYSMLKDANPKAAKMSADIMI 185

Query: 186 ELYHKNIWNDQKTVNIIADIGCFSKFTKVLVASLKFFLGRDEEEKEQNSDSDDEIDPRDT 365
           ELY KNIWND KTVN+IA +GCFSK TKVLV SLKFFLG DEE++E+++DS++E+D +  
Sbjct: 186 ELYKKNIWNDSKTVNVIATVGCFSKVTKVLVTSLKFFLGHDEEDEEEDTDSENEVDLKGA 245

Query: 366 MISNKFNXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFNFSALHLINNPQGLAEKLFKQME 545
           +++N+ N                           PAFNFS +HL++NPQG+AE LFKQ++
Sbjct: 246 LMANRVNKKTKKRTKQLAQIKKQAVKAQKKKKNAPAFNFSGIHLVHNPQGMAEGLFKQLQ 305

Query: 546 ASNDRFEVKLMTLDVVSRLIGLHNLFLFNFYPFIARLLLPHQREVTRILQFAAQASHELV 725
           A+N+RFEVKLM LDV+SRLIG+H+LFLF FYP+I R L PHQR+VTR+LQFAAQASHELV
Sbjct: 306 ATNERFEVKLMHLDVISRLIGIHDLFLFGFYPYITRFLQPHQRQVTRVLQFAAQASHELV 365

Query: 726 PYEVIEPVMRAIANNFIT 779
           P ++IEP+++ IANNFIT
Sbjct: 366 PGDIIEPILKTIANNFIT 383


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score =  320 bits (786), Expect = 1e-87
 Identities = 146/258 (56%), Positives = 193/258 (74%)
 Frame = +3

Query: 6   IKCQDKYLRDFLKTHIITDIXXXXXXXXXXXXXSTLQNFIFSMLQDSNTRAAKLSIDILV 185
           ++C DK LR FL+THI+TDI             S+LQ F++SML+D+N +AAK+S DI++
Sbjct: 126 LRCPDKNLRTFLQTHIVTDIKNMNAKHKDMKLNSSLQAFMYSMLKDANPKAAKMSADIMI 185

Query: 186 ELYHKNIWNDQKTVNIIADIGCFSKFTKVLVASLKFFLGRDEEEKEQNSDSDDEIDPRDT 365
           ELY KNIWND KTVN+IA +GCFSK TKVLV SLKFFLG DEE++E+++DS++E+D +  
Sbjct: 186 ELYKKNIWNDSKTVNVIATVGCFSKVTKVLVTSLKFFLGHDEEDEEEDTDSENEVDLKGA 245

Query: 366 MISNKFNXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFNFSALHLINNPQGLAEKLFKQME 545
           +++N+ N                           PAFNFS +HL++NPQG+AE LFKQ++
Sbjct: 246 LMANRVNKKTKKRTKQLAQIKKQAVKAQKKKKNAPAFNFSGIHLVHNPQGMAEGLFKQLQ 305

Query: 546 ASNDRFEVKLMTLDVVSRLIGLHNLFLFNFYPFIARLLLPHQREVTRILQFAAQASHELV 725
           A+N+RFEVKLM LDV+SRLIG+H+LFLF FYP+I R L PHQR+VTR+LQFAAQASHELV
Sbjct: 306 ATNERFEVKLMHLDVISRLIGIHDLFLFGFYPYITRFLQPHQRQVTRVLQFAAQASHELV 365

Query: 726 PYEVIEPVMRAIANNFIT 779
           P ++IEP+++ IANNFIT
Sbjct: 366 PGDIIEPILKTIANNFIT 383


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score =  320 bits (786), Expect = 1e-87
 Identities = 146/258 (56%), Positives = 193/258 (74%)
 Frame = +3

Query: 6   IKCQDKYLRDFLKTHIITDIXXXXXXXXXXXXXSTLQNFIFSMLQDSNTRAAKLSIDILV 185
           ++C DK LR FL+THI+TDI             S+LQ F++SML+D+N +AAK+S DI++
Sbjct: 126 LRCPDKNLRTFLQTHIVTDIKNMNAKHKDMKLNSSLQAFMYSMLKDANPKAAKMSADIMI 185

Query: 186 ELYHKNIWNDQKTVNIIADIGCFSKFTKVLVASLKFFLGRDEEEKEQNSDSDDEIDPRDT 365
           ELY KNIWND KTVN+IA +GCFSK TKVLV SLKFFLG DEE++E+++DS++E+D +  
Sbjct: 186 ELYKKNIWNDSKTVNVIATVGCFSKVTKVLVTSLKFFLGHDEEDEEEDTDSENEVDLKGA 245

Query: 366 MISNKFNXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFNFSALHLINNPQGLAEKLFKQME 545
           +++N+ N                           PAFNFS +HL++NPQG+AE LFKQ++
Sbjct: 246 LMANRVNKKTKKRTKQLAQIKKQAVKAQKKKKNAPAFNFSGIHLVHNPQGMAEGLFKQLQ 305

Query: 546 ASNDRFEVKLMTLDVVSRLIGLHNLFLFNFYPFIARLLLPHQREVTRILQFAAQASHELV 725
           A+N+RFEVKLM LDV+SRLIG+H+LFLF FYP+I R L PHQR+VTR+LQFAAQASHELV
Sbjct: 306 ATNERFEVKLMHLDVISRLIGIHDLFLFGFYPYITRFLQPHQRQVTRVLQFAAQASHELV 365

Query: 726 PYEVIEPVMRAIANNFIT 779
           P ++IEP+++ IANNFIT
Sbjct: 366 PGDIIEPILKTIANNFIT 383


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,509,804
Number of Sequences: 53049
Number of extensions: 437720
Number of successful extensions: 1928
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)