Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d18
         (345 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    27   0.20 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   4.2  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       22   7.4  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +2

Query: 101 ISKELLKTIKMKAVLATV-ISLALTTVVIGNAYYQKKQFYPSIVYLTNSNPSMAVM--YL 271
           ++   +K  KM  +++TV + L L + ++    Y + +     +YL  +   +  M  + 
Sbjct: 364 VANSQIKVTKMLLIVSTVFVCLNLPSYIVRVKIYLETEHTNMNIYLVQNCCQLFFMTNFG 423

Query: 272 QAFILVLLEGKXLRKIFFGQLR 337
             FIL  + G+  RK  FG  +
Sbjct: 424 INFILYCVSGQNFRKAIFGMFQ 445


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 122  FLGAPSK*YLHVPR*LNXYALRNILIVLKNIF 27
            + G P K Y  + +    YA+R  + VL NIF
Sbjct: 1800 YQGLPGKEYTVLGKYKRRYAMRPEIKVLANIF 1831


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 232 FNKFXSKHGSDVFASVYFSFIG 297
           FNKF  +   D+F   + SF+G
Sbjct: 8   FNKFFLEFFFDIFQLYFHSFLG 29


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 203 KKQFYPSIVYLTNSNPSMAVMYLQAFI 283
           K  F    +YL   NP+  V+Y+  F+
Sbjct: 382 KLVFDTPFLYLVRHNPTGMVLYMGRFV 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,169
Number of Sequences: 2352
Number of extensions: 5022
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)