Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d18
         (345 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...    66   8e-12
Z83107-2|CAB05503.2|  356|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z83107-1|CAB05506.2|  461|Caenorhabditis elegans Hypothetical pr...    27   3.6  
AL021566-1|CAA16501.1|  328|Caenorhabditis elegans Hypothetical ...    27   4.8  
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p...    26   6.3  
AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical ...    26   6.3  
Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical pr...    26   8.3  
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    26   8.3  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    26   8.3  

>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score = 65.7 bits (153), Expect = 8e-12
 Identities = 33/62 (53%), Positives = 40/62 (64%)
 Frame = +2

Query: 158 SLALTTVVIGNAYYQKKQFYPSIVYLTNSNPSMAVMYLQAFILVLLEGKXLRKIFFGQLR 337
           S   T   I NA+   KQFYPSIVYL+ SN SMAV+Y+Q  +LV L  + L+ I FG LR
Sbjct: 12  SCVATAATILNAFLINKQFYPSIVYLSKSNASMAVIYVQGIVLVYLMFQLLKSILFGDLR 71

Query: 338 PA 343
            A
Sbjct: 72  AA 73


>Z83107-2|CAB05503.2|  356|Caenorhabditis elegans Hypothetical
           protein F32A7.3b protein.
          Length = 356

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 62  VHXNLINEAHEDIISKELLKTIKMKAVLATVISLALTTVVIGNA 193
           V  NL+   H+ +   +  K  K KAV+  V+++++  +V+ +A
Sbjct: 239 VEPNLVGVGHDLLQVVQFFKENKEKAVMCIVLAVSMAAIVVLSA 282


>Z83107-1|CAB05506.2|  461|Caenorhabditis elegans Hypothetical
           protein F32A7.3a protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 62  VHXNLINEAHEDIISKELLKTIKMKAVLATVISLALTTVVIGNA 193
           V  NL+   H+ +   +  K  K KAV+  V+++++  +V+ +A
Sbjct: 344 VEPNLVGVGHDLLQVVQFFKENKEKAVMCIVLAVSMAAIVVLSA 387


>AL021566-1|CAA16501.1|  328|Caenorhabditis elegans Hypothetical
           protein F08E10.1 protein.
          Length = 328

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -1

Query: 225 IEG*NCFFW*YALPITTVVSARLITVANTAFILIVFRSSFEMISSCASLIKFXCTPKY 52
           IE    FF+     IT V ++  +T  N  FIL   +S +  I   A +  +   P Y
Sbjct: 87  IESPGLFFYLAITFITGVTTSVFVTFENRFFILFAQKSFWRHIRKFAIVFSYIIVPLY 144


>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
           protein T14B4.1 protein.
          Length = 1146

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +2

Query: 110 ELLKTIKMKAVLATVISLALTTVVIGNAY 196
           E+++T + KAVL   ++L L+TVV GNA+
Sbjct: 728 EVVQTARFKAVL---LALKLSTVVDGNAW 753


>AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical
           protein H04D03.4 protein.
          Length = 688

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 86  AHEDIISKELLKTIKMKAVLATVISLALTTVVIGNAYYQKKQFYPSIVYL 235
           AH DII    LK +++  V +  IS+A  T +I ++ Y  K   P + +L
Sbjct: 217 AHTDIIELFELKKLQILDVSSRQISIATPTKIILHSKYCSK-VLPELTFL 265


>Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical
           protein F27E5.1 protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 143 LATVISLALTTVVIGNAYYQKKQFYPSIVYLTNSNPSM 256
           +A V+ + L  +V  N +Y+  +F  SIV  T  N  +
Sbjct: 123 IAEVLDVPLGNLVFLNLFYEMSRFCTSIVAQTEDNKDL 160


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
            homolog protein.
          Length = 1846

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 100  HFEGAPKNYQNEGSVSDGDQSR 165
            + E  PKNY+N GS S    SR
Sbjct: 1800 YIETEPKNYRNNGSPSRNGNSR 1821


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
            formation protein 2 protein.
          Length = 1843

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 100  HFEGAPKNYQNEGSVSDGDQSR 165
            + E  PKNY+N GS S    SR
Sbjct: 1797 YIETEPKNYRNNGSPSRNGNSR 1818


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,994,910
Number of Sequences: 27780
Number of extensions: 120744
Number of successful extensions: 310
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)