Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30d15
(455 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 28 0.18
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 25 1.3
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 25 1.7
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.7
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 25 1.7
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 1.7
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 23 3.9
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 23 5.1
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 23 5.1
DQ004402-1|AAY21241.1| 144|Anopheles gambiae lysozyme c-8 protein. 23 5.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 5.1
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 6.7
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 27.9 bits (59), Expect = 0.18
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 77 SIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGD-LKK 253
S+ R KR+ + E A ++ R+KK+L +E SE ++ ++ + + ++K
Sbjct: 851 SVEDR-KRQLTNCRNEVVATEK--RIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQK 907
Query: 254 SKKVLEDIEKDNEDVEMSSDDENVV 328
K+ E +E+D + +E + EN++
Sbjct: 908 EKEAQEKLEEDGKRMEKWATKENML 932
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 25.0 bits (52), Expect = 1.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 437 YLFWRSYVCATKPGTV 390
+LFWR++V TKP +
Sbjct: 573 HLFWRAFVYITKPAII 588
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 24.6 bits (51), Expect = 1.7
Identities = 27/97 (27%), Positives = 44/97 (45%)
Frame = +2
Query: 113 IKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNE 292
+ +E A++E R KK+ +EE G E E E+ D D E+ E + +
Sbjct: 448 VSKEMEALRE-GRQKKVQITFEEEIYKGEEDYEGEE----DEED--------EEDEYEGD 494
Query: 293 DVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 403
D E +DE+ + G + T++D +GQY V
Sbjct: 495 DTEEDEEDEDD--ELAAGPLGTSDVVTVEDGDGQYVV 529
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 24.6 bits (51), Expect = 1.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 245 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKK 352
L+K K D +D+E+ E +E D EGG++
Sbjct: 953 LQKEVKKEVDAAEDDEEEEEEEQEEEEDEDEEGGEE 988
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 332 RPQRFHHLNSFRRLHYPFRCLLILFCFSLNRPR 234
R QRF L RR Y FR + FC + P+
Sbjct: 18 RLQRFVGLWGERRYRYKFRLAFLSFCLLVVIPK 50
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.6 bits (51), Expect = 1.7
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +2
Query: 95 KRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLED 274
+RK A++R A +E L++ + + +E + E+ + DA + +KK L +
Sbjct: 713 RRKVAALERYAAASREHDLLEQRIRLFEER----NNDREANFRLLEDA--YQSAKKTLAN 766
Query: 275 IEKDNEDVEMSSDDEN 322
+EK +V+ S D+N
Sbjct: 767 VEKKLAEVKAKSSDKN 782
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 23.4 bits (48), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 FVFKTQW-RNRLGADGSENAGRSNENGM 131
FV+ + R RLGAD AG NG+
Sbjct: 132 FVYPLDFARTRLGADVGRGAGEREFNGL 159
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 23.0 bits (47), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 FVFKTQW-RNRLGADGSENAGRSNENGM 131
FV+ + R RLGAD AG NG+
Sbjct: 132 FVYPLDFARTRLGADVGPGAGEREFNGL 159
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 23.0 bits (47), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 FVFKTQW-RNRLGADGSENAGRSNENGM 131
FV+ + R RLGAD AG NG+
Sbjct: 132 FVYPLDFARTRLGADVGPGAGEREFNGL 159
>DQ004402-1|AAY21241.1| 144|Anopheles gambiae lysozyme c-8 protein.
Length = 144
Score = 23.0 bits (47), Expect = 5.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 9 RDYLQKRVALLQNIFVFKTQWRNRLGADGSENAG 110
R LQ + L+QN + T N DGS++ G
Sbjct: 37 RSQLQDWICLIQNESRYDTSALNTKNRDGSKDYG 70
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.0 bits (47), Expect = 5.1
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 98 RKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDI 277
RK + ++ + + K M+ ++ EE+ EVM ++V+ D KK + ++ D+
Sbjct: 965 RKLKKLQDSKDKMSRNVNQKAMVLLEREEEQY-KEVMRRKKVV---EDDKKKIQAIITDL 1020
Query: 278 EKDNE---DVEMSSDDEN 322
+++ + V S DEN
Sbjct: 1021 DEEKKKKLKVAWSEVDEN 1038
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 22.6 bits (46), Expect = 6.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 278 EKDNEDVEMSSDDENVVVDSEGGKKRVFN 364
E D+ED E DD++ EG + N
Sbjct: 1825 EDDDEDDEDDDDDDDDTTTGEGNEHEADN 1853
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,112
Number of Sequences: 2352
Number of extensions: 8033
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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