Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30d15
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open read... 62 9e-10
BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open read... 62 9e-10
AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens ... 62 9e-10
BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open read... 62 1e-09
AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein... 37 0.029
S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding pr... 34 0.20
BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protei... 33 0.46
AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein. 33 0.46
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 33 0.61
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 33 0.61
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 33 0.61
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 33 0.61
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 33 0.61
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 33 0.61
Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein. 31 1.4
BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein ... 31 1.4
BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein. 31 1.4
BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein. 31 1.4
AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein ... 31 1.4
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 1.9
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 1.9
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 31 2.5
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 31 2.5
BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag dom... 31 2.5
BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein. 31 2.5
AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical rhabdomyos... 31 2.5
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 2.5
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 2.5
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 2.5
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 2.5
AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein. 31 2.5
L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein. 30 3.3
BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1 ... 30 3.3
AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1 ... 30 3.3
BC113449-1|AAI13450.1| 332|Homo sapiens family with sequence si... 30 4.3
BC112022-1|AAI12023.1| 332|Homo sapiens family with sequence si... 30 4.3
BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein. 30 4.3
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 4.3
AF494343-1|AAN07162.1| 332|Homo sapiens family with sequence si... 30 4.3
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 30 4.3
BC039317-1|AAH39317.2| 484|Homo sapiens coiled-coil domain cont... 29 5.7
BC011934-1|AAH11934.1| 227|Homo sapiens sperm associated antige... 29 5.7
AK098529-1|BAC05324.1| 302|Homo sapiens protein ( Homo sapiens ... 29 5.7
AK093051-1|BAC04035.1| 484|Homo sapiens protein ( Homo sapiens ... 29 5.7
AF382188-1|AAK60542.1| 484|Homo sapiens NYD-SP28 protein. 29 5.7
AL080251-4|CAI23420.1| 258|Homo sapiens novel protein protein. 29 7.6
X52079-1|CAA36298.1| 622|Homo sapiens ITF-2 DNA binding protein... 29 10.0
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 29 10.0
M74719-1|AAA60311.1| 667|Homo sapiens SEF2-1B protein protein. 29 10.0
BC125085-1|AAI25086.1| 667|Homo sapiens transcription factor 4 ... 29 10.0
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 29 10.0
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 29 10.0
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 29 10.0
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 29 10.0
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 29 10.0
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 29 10.0
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 29 10.0
AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant... 29 10.0
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 29 10.0
>BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 9e-10
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 68 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 247
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 248 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 412
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 9e-10
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 68 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 247
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 248 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 412
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ34249 fis, clone FCBBF4000500. ).
Length = 129
Score = 62.1 bits (144), Expect = 9e-10
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 68 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 247
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 248 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 412
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 61.7 bits (143), Expect = 1e-09
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 68 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 247
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 248 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 412
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMGTDI----KR--NKKTLLDQHGQYPIWMN 98
>AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein
protein.
Length = 1731
Score = 37.1 bits (82), Expect = 0.029
Identities = 26/114 (22%), Positives = 51/114 (44%)
Frame = +2
Query: 71 AKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLK 250
+K ++ K + + +K KEL +L K L ++E K + ++ + ++ + K
Sbjct: 1565 SKELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKK 1624
Query: 251 KSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 412
+ KKVL+ K + SDDEN V ++ ++ + +G W H
Sbjct: 1625 REKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFH 1678
>S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding protein
2 protein.
Length = 1722
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +2
Query: 71 AKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLK 250
+K ++ K + + +K K+L +L K L ++E K + ++ + ++ + K
Sbjct: 1529 SKELKKMDKPRKKKLKLGADKSKKLNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKK 1588
Query: 251 KSKKVLEDIEKDNEDVEMSSDDENVV 328
+ KKVL+ K + SDDEN V
Sbjct: 1589 REKKVLDIPSKYDWSGAEESDDENAV 1614
>BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protein
protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.46
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 107 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 286
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 287 NEDVEMSSDD 316
+E + D
Sbjct: 881 RFSLEDPTPD 890
>AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.46
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 107 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 286
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 287 NEDVEMSSDD 316
+E + D
Sbjct: 881 RFSLEDPTPD 890
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 352
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 385
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 249 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 298
>BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton 1 protein.
Length = 651
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 385
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein.
Length = 433
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 385
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 301 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 350
>BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein.
Length = 563
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 385
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 208 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 257
>AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton protein.
Length = 651
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 385
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 239 GDLKKSKKVLEDIEKDNEDVEMSSDDEN 322
GD KK +++E+D+ED EMS D+E+
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEED 39
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +2
Query: 83 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 262
RSR +R+ R+ R R + R + + K A + E+ + GD K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRSKEKA---EGGDSSKEKK 134
Query: 263 VLEDIEKDNEDVEMSSDDEN 322
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1265 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1324
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1325 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1361
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag domain
containing 4 protein.
Length = 569
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 137 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 316
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 364 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 423
Query: 317 ENVVVDSEGGKK 352
E+ D +GG+K
Sbjct: 424 ED--EDEDGGQK 433
>BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein.
Length = 569
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 137 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 316
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 364 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 423
Query: 317 ENVVVDSEGGKK 352
E+ D +GG+K
Sbjct: 424 ED--EDEDGGQK 433
>AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.2A protein.
Length = 407
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Frame = +2
Query: 95 KRKCRAIKRERYAVK---ELARLKKMLGVKDEEKPAGSEVME----------SEQVIFLD 235
KRK R KR+ K E+A L K V EE EV+ +EQ L
Sbjct: 239 KRKLREAKRQECETKIAQEIASLSKE-DVSKEEMNENEEVINILLAQENEILTEQEELLA 297
Query: 236 AGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 340
+ + +LED+++ NE++E+ ++ N + E
Sbjct: 298 MEQFLRRQIILEDLQRQNEELEIKNNHLNQAIHEE 332
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 95 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 265
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 266 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 370
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein.
Length = 689
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 137 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 316
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 484 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 543
Query: 317 ENVVVDSEGGKK 352
E+ D +GG+K
Sbjct: 544 ED--EDEDGGQK 553
>L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein.
Length = 655
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 KELARLKKMLG-VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 313
+E+ RL+ + ++ ++ SE E ++ D ++ + +LED+++ NE++E+ ++
Sbjct: 512 EEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNN 571
Query: 314 DENVVVDSE 340
N + E
Sbjct: 572 HLNQAIHEE 580
>BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1
protein.
Length = 655
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 KELARLKKMLG-VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 313
+E+ RL+ + ++ ++ SE E ++ D ++ + +LED+++ NE++E+ ++
Sbjct: 512 EEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNN 571
Query: 314 DENVVVDSE 340
N + E
Sbjct: 572 HLNQAIHEE 580
>AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1
variant protein.
Length = 462
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 KELARLKKMLG-VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 313
+E+ RL+ + ++ ++ SE E ++ D ++ + +LED+++ NE++E+ ++
Sbjct: 319 EEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNN 378
Query: 314 DENVVVDSE 340
N + E
Sbjct: 379 HLNQAIHEE 387
>BC113449-1|AAI13450.1| 332|Homo sapiens family with sequence
similarity 9, member A protein.
Length = 332
Score = 29.9 bits (64), Expect = 4.3
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 83 RSRWKRKCRAIKRE-RYAVKELARLKKMLGVK---DEEKPAGSEVMESEQVIFLDAGDLK 250
R+ K++ + KR+ R+ K L LK+ + K DE + A + +E +A
Sbjct: 154 RALKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAA 213
Query: 251 KSKKVLEDIEKDNEDVEMSSDDENVVVDSEGG 346
V+ED E++ ++ E ++E + EGG
Sbjct: 214 AEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGG 245
>BC112022-1|AAI12023.1| 332|Homo sapiens family with sequence
similarity 9, member A protein.
Length = 332
Score = 29.9 bits (64), Expect = 4.3
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 83 RSRWKRKCRAIKRE-RYAVKELARLKKMLGVK---DEEKPAGSEVMESEQVIFLDAGDLK 250
R+ K++ + KR+ R+ K L LK+ + K DE + A + +E +A
Sbjct: 154 RALKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAA 213
Query: 251 KSKKVLEDIEKDNEDVEMSSDDENVVVDSEGG 346
V+ED E++ ++ E ++E + EGG
Sbjct: 214 AEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGG 245
>BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein.
Length = 259
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 83 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 262
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 134
Query: 263 VLEDIEKDNEDVEMSSDDEN 322
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 83 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 262
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 134
Query: 263 VLEDIEKDNEDVEMSSDDEN 322
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>AF494343-1|AAN07162.1| 332|Homo sapiens family with sequence
similarity 9, member A protein.
Length = 332
Score = 29.9 bits (64), Expect = 4.3
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 83 RSRWKRKCRAIKRE-RYAVKELARLKKMLGVK---DEEKPAGSEVMESEQVIFLDAGDLK 250
R+ K++ + KR+ R+ K L LK+ + K DE + A + +E +A
Sbjct: 154 RALKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAA 213
Query: 251 KSKKVLEDIEKDNEDVEMSSDDENVVVDSEGG 346
V+ED E++ ++ E ++E + EGG
Sbjct: 214 AEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGG 245
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +2
Query: 83 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 262
RSR +R+ R+ R R + R + ++ K + E+ D G+ K KK
Sbjct: 104 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT---DGGESSKEKK 160
Query: 263 VLEDIEKDNEDVEMSSDDEN 322
+D ++D ++ + + D+N
Sbjct: 161 KDKDDKEDEKEKDAGNFDQN 180
>BC039317-1|AAH39317.2| 484|Homo sapiens coiled-coil domain
containing 65 protein.
Length = 484
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +2
Query: 80 IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSK 259
+ W++ +K A ++ + L VKDE+ EV + DA + K K
Sbjct: 219 VEDLWRKFQDVLKNYTDATEDRKAAFETLQVKDEKSSKEIEVQMKKIQKLQDAITISKGK 278
Query: 260 KVLEDIEKDNEDVEMSSDDENVVV 331
++ E ++E+ + +D E V+V
Sbjct: 279 IMIHSRESEDENRYIRNDKELVLV 302
>BC011934-1|AAH11934.1| 227|Homo sapiens sperm associated antigen 7
protein.
Length = 227
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 125 RYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFL-DAGDLKKSKKVLEDIEK 283
R A ++ ARLKK+ + ++K + ME E F+ D+G +KK + + IE+
Sbjct: 25 RKAREQAARLKKLQEQEKQQKVEFRKRMEKEVSDFIQDSGQIKKKFQPMNKIER 78
>AK098529-1|BAC05324.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ25663 fis, clone TST01640. ).
Length = 302
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +2
Query: 80 IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSK 259
+ W++ +K A ++ + L VKDE+ EV + DA + K K
Sbjct: 24 VEDLWRKFQDVLKNYTDATEDRKAAFETLQVKDEKSSKEIEVQMKKIQKLQDAITISKGK 83
Query: 260 KVLEDIEKDNEDVEMSSDDENVVV 331
++ E ++E+ + +D E V+V
Sbjct: 84 IMIHSRESEDENRYIRNDKELVLV 107
>AK093051-1|BAC04035.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ35732 fis, clone TESTI2003141. ).
Length = 484
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +2
Query: 80 IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSK 259
+ W++ +K A ++ + L VKDE+ EV + DA + K K
Sbjct: 219 VEDLWRKFQDVLKNYTDATEDRKAAFETLQVKDEKSSKEIEVQMKKIQKLQDAITISKGK 278
Query: 260 KVLEDIEKDNEDVEMSSDDENVVV 331
++ E ++E+ + +D E V+V
Sbjct: 279 IMIHSRESEDENRYIRNDKELVLV 302
>AF382188-1|AAK60542.1| 484|Homo sapiens NYD-SP28 protein.
Length = 484
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +2
Query: 80 IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSK 259
+ W++ +K A ++ + L VKDE+ EV + DA + K K
Sbjct: 219 VEDLWRKFQDVLKNYTDATEDRKTAFETLQVKDEKSSKEIEVQMKKIQKLQDAITISKGK 278
Query: 260 KVLEDIEKDNEDVEMSSDDENVVV 331
++ E ++E+ + +D E V+V
Sbjct: 279 IMIHSRESEDENRYIRNDKELVLV 302
>AL080251-4|CAI23420.1| 258|Homo sapiens novel protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.6
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = +2
Query: 83 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFL----DAGDLK 250
+ RW+ + + V L + EE E +++E V+F D K
Sbjct: 8 KRRWEEELAKRMNLQTMVDTLQEAAQEADAIQEEMNEKIERLKAELVVFKGLMSDVVPKK 67
Query: 251 KSKKVL--EDIEKDNEDVEMSSDDENVVVDSEGGKKRVFN 364
K +KV +DI + + +V SDDE ++ KR+FN
Sbjct: 68 KERKVASDDDISEQDGEVNRFSDDEVGSMNITDEMKRMFN 107
>X52079-1|CAA36298.1| 622|Homo sapiens ITF-2 DNA binding protein
protein.
Length = 622
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/64 (23%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 GVKDEEKPAGSEVMESEQVIFLDAGDLKKSK-KVLEDIEKDNEDVEMSSDDENVVVDSEG 343
G++ + +GS ++S+ + D K S+ K L+D +KD + + ++DDE++ + +
Sbjct: 455 GLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKA 514
Query: 344 GKKR 355
+++
Sbjct: 515 EREK 518
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 28.7 bits (61), Expect = 10.0
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +2
Query: 200 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 379
+V EQ+I +D+ ++ +V++ + KD +E D+E+ + + GGK+R K +
Sbjct: 1583 DVRIPEQIIVVDSSMVEN--EVIKSLGKDGS-LEDDEDEEDDLDEGVGGKRRSMEVKPAQ 1639
Query: 380 DQNGQY 397
+ Y
Sbjct: 1640 ASHTNY 1645
>M74719-1|AAA60311.1| 667|Homo sapiens SEF2-1B protein protein.
Length = 667
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/64 (23%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 GVKDEEKPAGSEVMESEQVIFLDAGDLKKSK-KVLEDIEKDNEDVEMSSDDENVVVDSEG 343
G++ + +GS ++S+ + D K S+ K L+D +KD + + ++DDE++ + +
Sbjct: 500 GLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKA 559
Query: 344 GKKR 355
+++
Sbjct: 560 EREK 563
>BC125085-1|AAI25086.1| 667|Homo sapiens transcription factor 4
protein.
Length = 667
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/64 (23%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 GVKDEEKPAGSEVMESEQVIFLDAGDLKKSK-KVLEDIEKDNEDVEMSSDDENVVVDSEG 343
G++ + +GS ++S+ + D K S+ K L+D +KD + + ++DDE++ + +
Sbjct: 500 GLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKA 559
Query: 344 GKKR 355
+++
Sbjct: 560 EREK 563
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 28.7 bits (61), Expect = 10.0
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +2
Query: 200 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 379
+V EQ+I +D+ ++ +V++ + KD +E D+E+ + + GGK+R K +
Sbjct: 477 DVRIPEQIIVVDSSMVEN--EVIKSLGKDGS-LEDDEDEEDDLDEGVGGKRRSMEVKPAQ 533
Query: 380 DQNGQY 397
+ Y
Sbjct: 534 ASHTNY 539
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 1058 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 1117
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 1118 SLVQTLSGGMKR 1129
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 173 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 340
+DE + G+E E+E+ G + +V+E E + E S D E + V+ E
Sbjct: 1994 EDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVE 2049
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 1059 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 1118
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 1119 SLVQTLSGGMKR 1130
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 1059 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 1118
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 1119 SLVQTLSGGMKR 1130
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 1059 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 1118
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 1119 SLVQTLSGGMKR 1130
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 28.7 bits (61), Expect = 10.0
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +2
Query: 200 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 379
+V EQ+I +D+ ++ +V++ + KD +E D+E+ + + GGK+R K +
Sbjct: 1331 DVRIPEQIIVVDSSMVEN--EVIKSLGKDGS-LEDDEDEEDDLDEGVGGKRRSMEVKPAQ 1387
Query: 380 DQNGQY 397
+ Y
Sbjct: 1388 ASHTNY 1393
>AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant 1
protein.
Length = 1440
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 408 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 467
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 468 SLVQTLSGGMKR 479
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 140 ELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 319
E+ ++K LG+ + + E + F +++ +++K ED+E+S+
Sbjct: 394 EMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRH 453
Query: 320 NVVVDSEGGKKR 355
++V GG KR
Sbjct: 454 SLVQTLSGGMKR 465
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,655,113
Number of Sequences: 237096
Number of extensions: 958462
Number of successful extensions: 4003
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 3738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -