Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d12
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    25   3.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.9  
AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    23   9.9  

>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 382 YFKPSNVDELVSY 420
           YF+P+NV+EL+ Y
Sbjct: 177 YFQPANVEELLKY 189


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 726  DSVSYFREEIERRPDARFYAEQGRR 652
            D +  F  E+E  PD R+ ++Q  R
Sbjct: 2010 DLIESFYGEVESNPDVRYRSQQSTR 2034


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 716 AIFGKRLKDVPMLDFMPSRAAGAKSVSAPRNSA 618
           A FG R+KD  MLD+   R      V++   SA
Sbjct: 460 ATFGLRVKDPSMLDYERVRELSLTVVASEVESA 492


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 197  PVVPP-TSTHLKPASAMYLAYPG 132
            P VPP T+T L+P S +  A PG
Sbjct: 1490 PSVPPATTTDLEPESGVSEAPPG 1512


>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 156 RHVFGISRYSRIVDCEIIVQRRED-RGHQTTCFK 58
           + V  +  ++ +V  E +VQ RED   ++  C K
Sbjct: 3   KFVVALLAFTAVVSAEFVVQTREDLLAYRAECVK 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,024
Number of Sequences: 2352
Number of extensions: 18594
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)