Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d11
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p pro...   213   3e-55
AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA...   213   3e-55
AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB...    38   0.019
BT010216-1|AAQ23534.1|  366|Drosophila melanogaster RH40749p pro...    30   2.8  
AE014297-4062|AAF56660.2|  366|Drosophila melanogaster CG6131-PA...    30   2.8  
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA...    29   8.7  

>AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p
           protein.
          Length = 477

 Score =  213 bits (519), Expect = 3e-55
 Identities = 106/186 (56%), Positives = 134/186 (72%)
 Frame = +2

Query: 179 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 358
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 359 LTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFM 538
            TVFA GAAATPV LLNAM + GKS +L  + V HMHTE    Y  PE KD FRS S FM
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFRSNSFFM 121

Query: 539 AANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSVDCVR 718
            ANVRK+VA+GR D +PIFL +IP LF+++I++PD++ I VSPPDNHGYCSLGTSVDCVR
Sbjct: 122 GANVRKAVADGRGDNVPIFLHEIPNLFYKQIVKPDVSFIHVSPPDNHGYCSLGTSVDCVR 181

Query: 719 AALVNS 736
           AAL+NS
Sbjct: 182 AALLNS 187


>AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA,
           isoform A protein.
          Length = 477

 Score =  213 bits (519), Expect = 3e-55
 Identities = 106/186 (56%), Positives = 134/186 (72%)
 Frame = +2

Query: 179 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 358
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 359 LTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFM 538
            TVFA GAAATPV LLNAM + GKS +L  + V HMHTE    Y  PE KD FRS S FM
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFRSNSFFM 121

Query: 539 AANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSVDCVR 718
            ANVRK+VA+GR D +PIFL +IP LF+++I++PD++ I VSPPDNHGYCSLGTSVDCVR
Sbjct: 122 GANVRKAVADGRGDNVPIFLHEIPNLFYKQIVKPDVSFIHVSPPDNHGYCSLGTSVDCVR 181

Query: 719 AALVNS 736
           AAL+NS
Sbjct: 182 AALLNS 187


>AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB,
           isoform B protein.
          Length = 104

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +2

Query: 179 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 358
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


>BT010216-1|AAQ23534.1|  366|Drosophila melanogaster RH40749p
           protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 595 PSGHPQAIPQEDHPARHRSYPGVSPRQPWLLQPG 696
           P   PQ +PQ  H  +    P V P  P L  PG
Sbjct: 197 PQPQPQPLPQPQHLPQQHHQPSVGPAPPRLQVPG 230


>AE014297-4062|AAF56660.2|  366|Drosophila melanogaster CG6131-PA
           protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 595 PSGHPQAIPQEDHPARHRSYPGVSPRQPWLLQPG 696
           P   PQ +PQ  H  +    P V P  P L  PG
Sbjct: 197 PQPQPQPLPQPQHLPQQHHQPSVGPAPPRLQVPG 230


>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
           protein.
          Length = 1669

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 595 PSGHPQAIPQEDHPARHRSYPGVSPRQP 678
           P  HPQ  P E HP +H  +P  S +QP
Sbjct: 58  PQQHPQQQP-EQHPEQHPQHPLHSQQQP 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,148,497
Number of Sequences: 53049
Number of extensions: 709051
Number of successful extensions: 1778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)