Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d06
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    27   0.64 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.9  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   7.9  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 312 CCGGEDFRVGITETIIQPHRYLCVHQ-PRESFGTKMHRIWNY*NVL*SRAST 464
           C  G++FR  + E + + HR   V+Q P    GT+   +  Y N+   R ST
Sbjct: 378 CISGQNFRKAVIE-MFRRHRKSRVNQEPNSGCGTQSELLRAYGNLALRRTST 428


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 174 ISWISIYEFNIGCRTQS-CHLWNEWYCPNEI 85
           ISW+S Y  N  CR ++  +L  E++C + +
Sbjct: 642 ISWLSSYLSNRSCRVKTGSYLSEEFFCTSGV 672


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 353 CFCNAHSEVFTSTTG 309
           C CN H+E+  S TG
Sbjct: 727 CDCNKHAEICDSETG 741


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 120 HLWNEWYCPNEIHFC 76
           H+WN W+    I FC
Sbjct: 553 HVWNTWFVLLTIIFC 567


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 514 TLQEPEVYKKPNPWDQFRPEKP 579
           TL +P   +    W ++RPE P
Sbjct: 92  TLDKPTAQQVMKCWKKYRPENP 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,197
Number of Sequences: 2352
Number of extensions: 14632
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)