Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d05
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519...    35   0.080
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440...    32   0.43 
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177...    31   1.3  
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873...    29   3.0  
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094...    29   4.0  
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325...    28   6.9  

>10_08_0799 -
           20650799-20650947,20651022-20651114,20651906-20651934,
           20652039-20652097,20652170-20652283,20652374-20652534,
           20652544-20652663,20652741-20653469,20654980-20655244
          Length = 572

 Score = 34.7 bits (76), Expect = 0.080
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +1

Query: 202 LENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 336
           L+ TV + +       +VP++   LI+ G+ILKD+ TL+  GV++
Sbjct: 48  LDATVGAFKEVVAGSCDVPAAQQRLIYKGRILKDEQTLESYGVET 92


>02_01_0593 +
           4408229-4408294,4408764-4409096,4409756-4409794,
           4409870-4409937,4410024-4410068,4410478-4410655,
           4410740-4410871,4410941-4411009,4411258-4411305,
           4411498-4411545,4411654-4411763,4412044-4412125,
           4412232-4412345
          Length = 443

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 214 VDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQE 321
           V  +  E + + + P     LIH+GK+LKD++TL+E
Sbjct: 83  VKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLEE 118


>03_01_0224 -
           1771582-1771727,1771855-1771980,1772489-1772517,
           1772689-1772747,1772816-1772929,1773030-1773238,
           1773347-1774087,1775678-1776238,1776295-1776419,
           1778187-1778317,1779020-1779178,1779471-1779728,
           1780140-1780164,1780531-1780592,1780944-1781003,
           1781112-1781219,1781703-1781838,1781880-1781929,
           1782024-1782096,1782209-1782345,1782441-1782527,
           1782624-1782721,1783259-1783369,1783685-1783769,
           1783880-1783969
          Length = 1259

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 211 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 336
           +V + +    +  +VP+    LI+ G+ILKD+ TL   GV++
Sbjct: 748 SVGAFKAIVAESCDVPAPQQRLIYKGRILKDEQTLASYGVET 789


>06_01_1069 +
           8731567-8731632,8732120-8732281,8733028-8733081,
           8733557-8733630,8733706-8733786,8734902-8735079,
           8735336-8735506,8736113-8736202,8736284-8736331,
           8736447-8736562,8736655-8736733,8737101-8737223
          Length = 413

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 232 EAEKRSNV-PSSSLELIHHGKILKDKATLQ 318
           E+ +  NV P+    LIH GKILKD  TL+
Sbjct: 31  ESTQGQNVYPADQQMLIHQGKILKDDTTLE 60


>09_04_0070 +
           14308446-14308511,14308844-14309005,14309420-14309473,
           14310009-14310073,14310391-14310459,14310590-14310767,
           14311085-14311231,14311316-14311432,14311507-14311619,
           14311703-14311781,14311892-14312020
          Length = 392

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 256 PSSSLELIHHGKILKDKATLQE 321
           P+    LIH GK+LKD  TL E
Sbjct: 40  PAEQQMLIHQGKVLKDDTTLDE 61


>05_01_0413 -
           3253345-3253461,3253595-3253666,3253763-3253876,
           3254050-3254163,3254420-3254520,3254616-3254694,
           3254789-3254863,3254955-3255017,3255281-3255361,
           3255449-3255574,3255898-3256022,3256722-3256839,
           3257420-3257554,3258029-3258175,3259016-3259321
          Length = 590

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 556 ALSILHEVELLAALGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTG 702
           A  ++HE     ALG  LQ ++    AHP L   L  L    + +   G
Sbjct: 510 AADLIHEASNAIALGTRLQDIKFAVHAHPTLSEVLDELFKAAKLQPREG 558


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,481,653
Number of Sequences: 37544
Number of extensions: 420661
Number of successful extensions: 1167
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)