Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d05
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical...    31   0.88 
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical...    31   0.88 
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81465-4|CAB03866.3|  613|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AL032646-13|CAA21687.3|  613|Caenorhabditis elegans Hypothetical...    29   3.5  
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical ...    28   8.2  

>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
           protein C09E7.8b protein.
          Length = 1080

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 172 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 276
           IER KL +  LE  +  LRTEA++ + V + SLE+
Sbjct: 742 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 776


>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
           protein C09E7.8a protein.
          Length = 1114

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 172 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 276
           IER KL +  LE  +  LRTEA++ + V + SLE+
Sbjct: 776 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 810


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
            H05G16.1 protein.
          Length = 1111

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 409  ELQQLNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGED 549
            + Q +   L    C+P A G T  + +LNDD +  E + ++ SL ED
Sbjct: 945  QTQPVRFDLPPSPCSPTAGGSTPFISILNDD-LFDECVSESRSLHED 990


>Z81465-4|CAB03866.3|  613|Caenorhabditis elegans Hypothetical
           protein Y54E2A.1 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 595 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 708
           L  + +  RR ++  P  P +   ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566


>AL032646-13|CAA21687.3|  613|Caenorhabditis elegans Hypothetical
           protein Y54E2A.1 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 595 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 708
           L  + +  RR ++  P  P +   ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566


>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical protein
            C36B1.8b protein.
          Length = 1052

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 619  RRGATAHPELPIALRHLTNLVRSRSSTGSTPGDT 720
            R   T  P++PIA  H    V++ ++TG   G++
Sbjct: 1010 RANGTYEPQIPIAYYHAQGTVQNSNNTGGVNGNS 1043


>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical protein
            C36B1.8a protein.
          Length = 1049

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 619  RRGATAHPELPIALRHLTNLVRSRSSTGSTPGDT 720
            R   T  P++PIA  H    V++ ++TG   G++
Sbjct: 1007 RANGTYEPQIPIAYYHAQGTVQNSNNTGGVNGNS 1040


>AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical
           protein F54D7.2 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 240 FSLSSKRIYCILESKIL*FVTFYWSRFHFYTQKYAW 133
           FS+SS  + C+L S  + F T +W +++      +W
Sbjct: 159 FSISSVELLCVLISTQIVFFTTHWEKYNTGIMFLSW 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,508,636
Number of Sequences: 27780
Number of extensions: 370620
Number of successful extensions: 1018
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)