Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30d02
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   3.2  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        24   5.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.4  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   9.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 343 NCDHRPGDCCHSSSCRCNLWGSNCRCQRMGLF 438
           +CD   G C    SC+ N+ G +CR  R+G F
Sbjct: 457 SCDPVTGVC----SCKENVEGRHCRECRLGYF 484


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 223 SYIDPGDDDLEVNLP--DYGEDPADLQLLQDVGKRACVRRG 339
           S +D  DD++EV+LP  ++  D   + +L  +G R     G
Sbjct: 314 SLVDFDDDEVEVHLPKFEFNSDYNLIPILNQMGIREAFDSG 354


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 544 VGECCGFRWSGGQVGWLELVAASEELRSLSPTPTSGRAP 428
           +G   G    GG  G L  +    +L +LSP  + G  P
Sbjct: 298 LGSSLGSAHHGGSAGTLGSLVGKYDLSALSPPGSLGGVP 336


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 473 GAPVVVSYPHFW 438
           G+P  VS+PHF+
Sbjct: 264 GSPTFVSFPHFY 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,768
Number of Sequences: 2352
Number of extensions: 12047
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)