Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30c24
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    25   3.2  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    24   5.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.8  

>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 34  GTSNG-VNKSSGRFPGIVIIIILAEFCERFSYSGMRAFLTLYL 159
           G S G +N     F  +V I+   E C R +Y G+   +T YL
Sbjct: 177 GDSGGPLNVGDSNFRELVGIVSWGEGCARPNYPGVYTRVTRYL 219


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 309 CGR*HFGCNNCNTAFRSTWKI 371
           CG+     NNC+  FR  W I
Sbjct: 135 CGQFVVALNNCHYLFRHIWDI 155


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 347 GIAVIATKMLPAAYTNIIYKIVLNFPR*LS--ANMPPIIGKTYTNVLK 210
           GIAV    +L   +T   YK +LN P  LS   ++ P + ++ T +L+
Sbjct: 606 GIAVFHNHVLDGGFTLPFYKQLLNKPITLSDIEDVDPDLHRSLTWILE 653


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 96  NDNNNNSGKTTRTLIHS 46
           N+NNNN+G  T   ++S
Sbjct: 101 NNNNNNNGSNTGATVNS 117


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 325 LVAITAIPHFALPGRLCTLIG-LFMITV 405
           L +   +P   LPGR+  LIG LF  T+
Sbjct: 361 LASEALLPRLPLPGRIKALIGNLFAQTI 388


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 723 YTFDEIDNNIAFGFLYDVFIFCTDEYNY 640
           YTF+     +A GF+   F +  D +N+
Sbjct: 188 YTFESAVKVMARGFILQPFTYLRDAWNW 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,669
Number of Sequences: 2352
Number of extensions: 17709
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)