Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c24
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein. 215 2e-55
BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 1... 215 2e-55
BC020743-1|AAH20743.1| 248|Homo sapiens Unknown (protein for IM... 201 2e-51
U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein. 181 2e-45
U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide cot... 181 2e-45
BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 1... 181 2e-45
BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 1... 181 2e-45
BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 1... 181 2e-45
AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide... 181 2e-45
AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 1... 181 2e-45
AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 1... 181 2e-45
AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide tra... 181 2e-45
AB001328-1|BAA22632.1| 208|Homo sapiens pH-sensing regulatory f... 147 4e-35
AL353574-1|CAC27441.1| 282|Homo sapiens solute carrier family 1... 123 8e-28
AY050629-1|AAK95565.1| 633|Homo sapiens peptide/histidine trans... 67 7e-11
AY038999-1|AAK72099.1| 577|Homo sapiens peptide/histidine trans... 66 1e-10
BC146803-1|AAI46804.1| 371|Homo sapiens SLC15A4 protein protein. 63 9e-10
BC037974-1|AAH37974.1| 581|Homo sapiens solute carrier family 1... 62 2e-09
AF135600-1|AAQ13565.1| 581|Homo sapiens osteoclast transporter ... 62 2e-09
AB020598-1|BAA93432.1| 581|Homo sapiens peptide transporter 3 p... 62 2e-09
BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein. 60 1e-08
BC028394-1|AAH28394.2| 512|Homo sapiens SLC15A4 protein protein. 56 1e-07
X68684-1|CAA48643.1| 379|Homo sapiens ZNF11B protein. 32 1.9
BC107726-1|AAI07727.1| 606|Homo sapiens ZNF33B protein protein. 32 1.9
BC048313-1|AAH48313.1| 584|Homo sapiens ZNF33B protein protein. 32 1.9
AL022345-3|CAI23623.1| 778|Homo sapiens zinc finger protein 33B... 32 1.9
AJ491697-1|CAD36956.1| 778|Homo sapiens zinc finger protein 33b... 32 1.9
BC109104-1|AAI09105.1| 833|Homo sapiens sema domain, immunoglob... 30 9.9
BC109103-1|AAI09104.1| 833|Homo sapiens sema domain, immunoglob... 30 9.9
AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein. 30 9.9
AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein. 30 9.9
>S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein.
Length = 729
Score = 215 bits (524), Expect = 2e-55
Identities = 99/220 (45%), Positives = 146/220 (66%), Gaps = 2/220 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I++ EFCERFSY GM+A L LY L + +D +T YH FS+L Y PI+G
Sbjct: 42 YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHFA--LPGRLCTLIGLFMITVGTGGIK 423
+AD++LGKF+TI+Y+ VY G+++ ++ A+P + + +LIGL +I +GTGGIK
Sbjct: 102 AIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIK 161
Query: 424 PCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSL 603
PCV AFGGDQF+ E YFS+ Y ++ GSLI+ ++P++R +V CFGE DCY+L
Sbjct: 162 PCVAAFGGDQFEEKHAEER-TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGE-DCYAL 219
Query: 604 AFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
AFG PGL++++++V+F Y PEGN+V KC+
Sbjct: 220 AFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCI 259
>BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 15
(H+/peptide transporter), member 2 protein.
Length = 729
Score = 215 bits (524), Expect = 2e-55
Identities = 99/220 (45%), Positives = 146/220 (66%), Gaps = 2/220 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I++ EFCERFSY GM+A L LY L + +D +T YH FS+L Y PI+G
Sbjct: 42 YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHFA--LPGRLCTLIGLFMITVGTGGIK 423
+AD++LGKF+TI+Y+ VY G+++ ++ A+P + + +LIGL +I +GTGGIK
Sbjct: 102 AIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIK 161
Query: 424 PCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSL 603
PCV AFGGDQF+ E YFS+ Y ++ GSLI+ ++P++R +V CFGE DCY+L
Sbjct: 162 PCVAAFGGDQFEEKHAEER-TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGE-DCYAL 219
Query: 604 AFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
AFG PGL++++++V+F Y PEGN+V KC+
Sbjct: 220 AFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCI 259
>BC020743-1|AAH20743.1| 248|Homo sapiens Unknown (protein for
IMAGE:4770307) protein.
Length = 248
Score = 201 bits (490), Expect = 2e-51
Identities = 94/207 (45%), Positives = 139/207 (67%), Gaps = 2/207 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I++ EFCERFSY GM+A L LY L + +D +T YH FS+L Y PI+G
Sbjct: 42 YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHFA--LPGRLCTLIGLFMITVGTGGIK 423
+AD++LGKF+TI+Y+ VY G+++ ++ A+P + + +LIGL +I +GTGGIK
Sbjct: 102 AIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIK 161
Query: 424 PCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSL 603
PCV AFGGDQF+ E YFS+ Y ++ GSLI+ ++P++R +V CFGE DCY+L
Sbjct: 162 PCVAAFGGDQFEEKHAEER-TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGE-DCYAL 219
Query: 604 AFGAPGLVVLMSIVIFVSAKNKYIIKK 684
AFG PGL++++++V+F K KK
Sbjct: 220 AFGVPGLLMVIALVVFAMGSKKKKKKK 246
>U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide
cotransporter protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide
transporter PEPT1 protein.
Length = 705
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide
transporter protein.
Length = 708
Score = 181 bits (441), Expect = 2e-45
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Frame = +1
Query: 46 GVNKSSGRF--PGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFST 219
G++KS F P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F
Sbjct: 2 GMSKSHSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVA 61
Query: 220 LVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL--- 372
L Y+ PI+G ++AD++LGKF+TI+ + VY G + ++++I H P L
Sbjct: 62 LCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVH 121
Query: 373 --CTLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
+LIGL +I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ +
Sbjct: 122 VVLSLIGLALIALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTII 180
Query: 547 SPIMR-SEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCV 723
+P++R + ++ CY LAFG P ++ +++++FV Y KP+GN++ KC+
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCI 240
>AB001328-1|BAA22632.1| 208|Homo sapiens pH-sensing regulatory
factor of peptide transporter protein.
Length = 208
Score = 147 bits (356), Expect = 4e-35
Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 11/182 (6%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I++ EFCERFSY GMRA L LY + + + D+ +T YH F L Y+ PI+G
Sbjct: 22 YPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGA 81
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAI------PHFALPGRL-----CTLIGLFM 396
++AD++LGKF+TI+ + VY G + ++++I H P L +LIGL +
Sbjct: 82 LIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLAL 141
Query: 397 ITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHC 576
I +GTGGIKPCV+AFGGDQF+ QE +FSI Y + GSL++ ++P++R + +
Sbjct: 142 IALGTGGIKPCVSAFGGDQFE-EGQEKQRNRFFSIFYLAINAGSLLSTIITPMLRGKRYL 200
Query: 577 FG 582
G
Sbjct: 201 KG 202
>AL353574-1|CAC27441.1| 282|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 282
Score = 123 bits (296), Expect = 8e-28
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 11/187 (5%)
Frame = +1
Query: 133 MRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGGILADNYLGKFRTILYMMFVYA 312
MRA L LY + + + D+ +T YH F L Y+ PI+G ++AD++LGKF+TI+ + VY
Sbjct: 1 MRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYT 60
Query: 313 AGNILVAITAI------PHFALPGRL-----CTLIGLFMITVGTGGIKPCVTAFGGDQFK 459
G + ++++I H P L +LIGL +I +GTGGIKPCV+AFGGDQF+
Sbjct: 61 IGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFE 120
Query: 460 IPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLAFGAPGLVVLMS 639
QE +FSI Y + GSL++ ++P++R + + G L P +L
Sbjct: 121 -EGQEKQRNRFFSIFYLAINAGSLLSTIITPMLRGKRYLKGTS--VGLFLVRPSPCLLRF 177
Query: 640 IVIFVSA 660
++ F SA
Sbjct: 178 VLFFPSA 184
>AY050629-1|AAK95565.1| 633|Homo sapiens peptide/histidine
transporter protein.
Length = 633
Score = 66.9 bits (156), Expect = 7e-11
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Frame = +1
Query: 58 SSGRFPGIVII---IILAEFCERFSYSGMRAFLTLYLR-SKLGYTDDGATETYHVFSTLV 225
++G F G ++ ++L E ER ++ G+ + L L+L + + A+E +F L
Sbjct: 26 AAGAFAGRLLACGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLT 85
Query: 226 YVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAIP-------------HFALPG 366
Y+ GG LAD LG+ R IL + +Y G + + A P + PG
Sbjct: 86 YLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPG 145
Query: 367 -----RLC---TLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCV 522
R C T GL ++ +G +K +T FG DQ K E+ +F+ Y+++ +
Sbjct: 146 PDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEA-TRRFFNWFYWSINL 204
Query: 523 GSLIAKTVSPIMRSEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVV 702
G++++ ++ V + + P + V ++ V+F+ ++ +I K P+G+
Sbjct: 205 GAILSLGGIAYIQQNV-------SFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAF 257
Query: 703 IDFVKCVS 726
D K ++
Sbjct: 258 TDMFKILT 265
>AY038999-1|AAK72099.1| 577|Homo sapiens peptide/histidine
transporter protein.
Length = 577
Score = 66.1 bits (154), Expect = 1e-10
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLR-SKLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L E ER ++ G+ + L L+L + + A+E +F L Y+ GG LAD
Sbjct: 40 VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP-------------HFALPG-----RLC---TLI 384
LG+ R IL + +Y G + + A P + PG R C T
Sbjct: 100 LGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFA 159
Query: 385 GLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRS 564
GL ++ +G +K +T FG DQ K E+ +F+ Y+++ +G++++ ++
Sbjct: 160 GLVLVGLGVATVKANITPFGADQVKDRGPEA-TRRFFNWFYWSINLGAILSLGGIAYIQQ 218
Query: 565 EVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCVS 726
V + + P + V ++ V+F+ ++ +I K P+G+ D K ++
Sbjct: 219 NVS-------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILT 265
>BC146803-1|AAI46804.1| 371|Homo sapiens SLC15A4 protein protein.
Length = 371
Score = 63.3 bits (147), Expect = 9e-10
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLR-SKLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L ER ++ G+ + L L+L + + A+E +F L Y+ GG LAD
Sbjct: 40 VLLTGLLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP-------------HFALPG-----RLC---TLI 384
LG+ R IL + +Y G + + A P + PG R C T
Sbjct: 100 LGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFA 159
Query: 385 GLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRS 564
GL ++ +G +K +T FG DQ K E+ +F+ Y+++ +G++++ ++
Sbjct: 160 GLVLVGLGVATVKANITPFGADQVKDRGPEA-TRRFFNWFYWSINLGAILSLGGIAYIQQ 218
Query: 565 EVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCVS 726
V + + P + V ++ V+F+ ++ +I K P+G+ D K ++
Sbjct: 219 NVS-------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILT 265
>BC037974-1|AAH37974.1| 581|Homo sapiens solute carrier family 15,
member 3 protein.
Length = 581
Score = 62.1 bits (144), Expect = 2e-09
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLRS-KLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L E ER ++ G+ A L LYL S +T + AT VF Y+ +GG LAD Y
Sbjct: 38 VLLVEMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVY 97
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP----HFA--LP----GRLCTLIG---------- 387
LG++R + + +Y A + L+ TA P F +P G C G
Sbjct: 98 LGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYC 157
Query: 388 -------LFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
L ++ + ++ +T+FG DQ +++ +F+ Y+++ +G++++ V
Sbjct: 158 APVLYAGLLLLGLAASSVRSNLTSFGADQVMDLGRDA-TRRFFNWFYWSINLGAVLSLLV 216
Query: 547 SPIMRSEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVK 717
++ + + L + P V ++ IF+ A +I K P G+ V +K
Sbjct: 217 VAFIQQNI-------SFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLK 266
>AF135600-1|AAQ13565.1| 581|Homo sapiens osteoclast transporter
hOCTP protein.
Length = 581
Score = 62.1 bits (144), Expect = 2e-09
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLRS-KLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L E ER ++ G+ A L LYL S +T + AT VF Y+ +GG LAD Y
Sbjct: 38 VLLVEMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVY 97
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP----HFA--LP----GRLCTLIG---------- 387
LG++R + + +Y A + L+ TA P F +P G C G
Sbjct: 98 LGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYC 157
Query: 388 -------LFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
L ++ + ++ +T+FG DQ +++ +F+ Y+++ +G++++ V
Sbjct: 158 APVLYAGLLLLGLAASSVRSNLTSFGADQVMDLGRDA-TRRFFNWFYWSINLGAVLSLLV 216
Query: 547 SPIMRSEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVK 717
++ + + L + P V ++ IF+ A +I K P G+ V +K
Sbjct: 217 VAFIQQNI-------SFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLK 266
>AB020598-1|BAA93432.1| 581|Homo sapiens peptide transporter 3
protein.
Length = 581
Score = 62.1 bits (144), Expect = 2e-09
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLRS-KLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L E ER ++ G+ A L LYL S +T + AT VF Y+ +GG LAD Y
Sbjct: 38 VLLVEMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVY 97
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP----HFA--LP----GRLCTLIG---------- 387
LG++R + + +Y A + L+ TA P F +P G C G
Sbjct: 98 LGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYC 157
Query: 388 -------LFMITVGTGGIKPCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTV 546
L ++ + ++ +T+FG DQ +++ +F+ Y+++ +G++++ V
Sbjct: 158 APVLYAGLLLLGLAASSVRSNLTSFGADQVMDLGRDA-TRRFFNWFYWSINLGAVLSLLV 216
Query: 547 SPIMRSEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVK 717
++ + + L + P V ++ IF+ A +I K P G+ V +K
Sbjct: 217 VAFIQQNI-------SFLLGYSIPVGCVGLAFFIFLFATPVFITKPPMGSQVSSMLK 266
>BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein.
Length = 313
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 91 IILAEFCERFSYSGMRAFLTLYLRS-KLGYTDDGATETYHVFSTLVYVFPIIGGILADNY 267
++L E ER ++ G+ A L LYL S +T + AT VF Y+ +GG LAD Y
Sbjct: 38 VLLVEMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVY 97
Query: 268 LGKFRTILYMMFVYAAGNILVAITAIP 348
LG++R + + +Y A + L+ TA P
Sbjct: 98 LGRYRAVALSLLLYLAASGLLPATAFP 124
>BC028394-1|AAH28394.2| 512|Homo sapiens SLC15A4 protein protein.
Length = 512
Score = 56.4 bits (130), Expect = 1e-07
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Frame = +1
Query: 190 ATETYHVFSTLVYVFPIIGGILADNYLGKFRTILYMMFVYAAGNILVAITAIP------- 348
A+E +F L Y+ GG LAD LG+ R IL + +Y G + + A P
Sbjct: 9 ASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRAALC 68
Query: 349 ------HFALPG-----RLC---TLIGLFMITVGTGGIKPCVTAFGGDQFKIPEQESHLA 486
+ PG R C T GL ++ +G +K +T FG DQ K E+
Sbjct: 69 GSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEA-TR 127
Query: 487 AYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLAFGAPGLVVLMSIVIFVSAKN 666
+F+ Y+++ +G++++ ++ V + + P + V ++ V+F+ ++
Sbjct: 128 RFFNWFYWSINLGAILSLGGIAYIQQNVS-------FVTGYAIPTVCVGLAFVVFLCGQS 180
Query: 667 KYIIKKPEGNVVIDFVKCVS 726
+I K P+G+ D K ++
Sbjct: 181 VFITKPPDGSAFTDMFKILT 200
>X68684-1|CAA48643.1| 379|Homo sapiens ZNF11B protein.
Length = 379
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 312 GR*HFGCNNCNTAFRSTWKIMHSDR--SVHDNSRHGRHKALRDRFWRRS----VQNT*TG 473
G HF CN C AF W+ H R VH +H + FW +S Q + TG
Sbjct: 250 GEKHFECNECGKAF---WEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTG 306
Query: 474 E-PSRC 488
E P C
Sbjct: 307 EKPFEC 312
>BC107726-1|AAI07727.1| 606|Homo sapiens ZNF33B protein protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 312 GR*HFGCNNCNTAFRSTWKIMHSDR--SVHDNSRHGRHKALRDRFWRRS----VQNT*TG 473
G HF CN C AF W+ H R VH +H + FW +S Q + TG
Sbjct: 325 GEKHFECNECGKAF---WEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTG 381
Query: 474 E-PSRC 488
E P C
Sbjct: 382 EKPFEC 387
>BC048313-1|AAH48313.1| 584|Homo sapiens ZNF33B protein protein.
Length = 584
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 312 GR*HFGCNNCNTAFRSTWKIMHSDR--SVHDNSRHGRHKALRDRFWRRS----VQNT*TG 473
G HF CN C AF W+ H R VH +H + FW +S Q + TG
Sbjct: 325 GEKHFECNECGKAF---WEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTG 381
Query: 474 E-PSRC 488
E P C
Sbjct: 382 EKPFEC 387
>AL022345-3|CAI23623.1| 778|Homo sapiens zinc finger protein 33B
protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 312 GR*HFGCNNCNTAFRSTWKIMHSDR--SVHDNSRHGRHKALRDRFWRRS----VQNT*TG 473
G HF CN C AF W+ H R VH +H + FW +S Q + TG
Sbjct: 325 GEKHFECNECGKAF---WEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTG 381
Query: 474 E-PSRC 488
E P C
Sbjct: 382 EKPFEC 387
>AJ491697-1|CAD36956.1| 778|Homo sapiens zinc finger protein 33b
protein.
Length = 778
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 312 GR*HFGCNNCNTAFRSTWKIMHSDR--SVHDNSRHGRHKALRDRFWRRS----VQNT*TG 473
G HF CN C AF W+ H R VH +H + FW +S Q + TG
Sbjct: 325 GEKHFECNECGKAF---WEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTG 381
Query: 474 E-PSRC 488
E P C
Sbjct: 382 EKPFEC 387
>BC109104-1|AAI09105.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 29.9 bits (64), Expect = 9.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 97 LAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFS 216
LA RFS +G++ FLTL L G GA E FS
Sbjct: 38 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFS 77
>BC109103-1|AAI09104.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 29.9 bits (64), Expect = 9.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 97 LAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFS 216
LA RFS +G++ FLTL L G GA E FS
Sbjct: 38 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFS 77
>AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein.
Length = 833
Score = 29.9 bits (64), Expect = 9.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 97 LAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFS 216
LA RFS +G++ FLTL L G GA E FS
Sbjct: 38 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFS 77
>AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein.
Length = 963
Score = 29.9 bits (64), Expect = 9.9
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 97 LAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFS 216
LA RFS +G++ FLTL L G GA E FS
Sbjct: 168 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFS 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,471,175
Number of Sequences: 237096
Number of extensions: 2495482
Number of successful extensions: 4468
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4423
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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