Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c24
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 181 4e-46
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 181 4e-46
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 179 2e-45
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 179 2e-45
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 173 8e-44
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 171 3e-43
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 32 0.48
U41996-1|AAA83471.2| 306|Caenorhabditis elegans Serpentine rece... 29 3.4
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 28 7.9
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 181 bits (441), Expect = 4e-46
Identities = 88/211 (41%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I+ EFCERFSY GMR LT YL + L +TD +T ++ F+ L Y P++G
Sbjct: 44 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 103
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHF-ALPGRLCTLIGLFMITVGTGGIKP 426
I+AD Y+GKF TI + +YA G +++A+ + +F + L GL +I GTGGIKP
Sbjct: 104 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 163
Query: 427 CVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLA 606
CV+AFGGDQF++ QE L+ +FS+ YF++ GS+I+ +SPI RS+ C G+ CY +A
Sbjct: 164 CVSAFGGDQFEL-GQERMLSLFFSMFYFSINAGSMISTFISPIFRSQ-PCLGQDSCYPMA 221
Query: 607 FGAPGLVVLMSIVIFVSAKNKYIIKKPEGNV 699
FG P ++++++ ++F+ Y P+ NV
Sbjct: 222 FGIPAILMIVATLVFMGGSFWYKKNPPKDNV 252
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 181 bits (441), Expect = 4e-46
Identities = 88/211 (41%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P + I+ EFCERFSY GMR LT YL + L +TD +T ++ F+ L Y P++G
Sbjct: 5 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 64
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHF-ALPGRLCTLIGLFMITVGTGGIKP 426
I+AD Y+GKF TI + +YA G +++A+ + +F + L GL +I GTGGIKP
Sbjct: 65 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 124
Query: 427 CVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLA 606
CV+AFGGDQF++ QE L+ +FS+ YF++ GS+I+ +SPI RS+ C G+ CY +A
Sbjct: 125 CVSAFGGDQFEL-GQERMLSLFFSMFYFSINAGSMISTFISPIFRSQ-PCLGQDSCYPMA 182
Query: 607 FGAPGLVVLMSIVIFVSAKNKYIIKKPEGNV 699
FG P ++++++ ++F+ Y P+ NV
Sbjct: 183 FGIPAILMIVATLVFMGGSFWYKKNPPKDNV 213
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 179 bits (435), Expect = 2e-45
Identities = 86/221 (38%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Frame = +1
Query: 67 RFPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIG 246
++P +I+ E CERFS+ GMRA LTLY + L ++ +T +H F+ + Y P++G
Sbjct: 29 KWPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLG 88
Query: 247 GILADNYLGKFRTILYMMFVYAAGNILVAITAI-PHFALPGRLCTLIGLFMITVGTGGIK 423
ILAD Y+GKF TI ++ YA G IL+A ++I P + L L+GL ++ +GTGGIK
Sbjct: 89 SILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHPLLDLLGLLIVGLGTGGIK 148
Query: 424 PCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSL 603
PCV+AFGGDQF ++ +FS+ YF++ GSLI+ ++P RS + CFG CY L
Sbjct: 149 PCVSAFGGDQFP-AHYTRMISLFFSMFYFSINAGSLISMWLTPYFRS-MSCFGHDSCYPL 206
Query: 604 AFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCVS 726
AFG P ++++++ ++F++ Y P+ N++ + ++
Sbjct: 207 AFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTIT 247
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 179 bits (435), Expect = 2e-45
Identities = 86/221 (38%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Frame = +1
Query: 67 RFPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIG 246
++P +I+ E CERFS+ GMRA LTLY + L ++ +T +H F+ + Y P++G
Sbjct: 29 KWPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLG 88
Query: 247 GILADNYLGKFRTILYMMFVYAAGNILVAITAI-PHFALPGRLCTLIGLFMITVGTGGIK 423
ILAD Y+GKF TI ++ YA G IL+A ++I P + L L+GL ++ +GTGGIK
Sbjct: 89 SILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHPLLDLLGLLIVGLGTGGIK 148
Query: 424 PCVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSL 603
PCV+AFGGDQF ++ +FS+ YF++ GSLI+ ++P RS + CFG CY L
Sbjct: 149 PCVSAFGGDQFP-AHYTRMISLFFSMFYFSINAGSLISMWLTPYFRS-MSCFGHDSCYPL 206
Query: 604 AFGAPGLVVLMSIVIFVSAKNKYIIKKPEGNVVIDFVKCVS 726
AFG P ++++++ ++F++ Y P+ N++ + ++
Sbjct: 207 AFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTIT 247
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 173 bits (422), Expect = 8e-44
Identities = 80/202 (39%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P V ++ EFCERFS+ GM+ L +YL ++ ++ AT YH+F+ + Y+ P+IG
Sbjct: 13 YPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGS 72
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHFALPGR-LCTLIGLFMITVGTGGIKP 426
I+AD+ G+F+ ILY +Y G++L+++ A+P + P R GLF+I TG IKP
Sbjct: 73 IMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGLFVIAFATGCIKP 132
Query: 427 CVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLA 606
CV+AF DQF +Q+ + +FS YF + GSL A ++PI+R V CFG C+ LA
Sbjct: 133 CVSAFAADQF-TEDQKDLRSQFFSFFYFAINGGSLFAIIITPILRGRVQCFGNAHCFPLA 191
Query: 607 FGAPGLVVLMSIVIFVSAKNKY 672
FG PG+++L+++++F+ + Y
Sbjct: 192 FGVPGVLMLLALILFLMGWSMY 213
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 171 bits (417), Expect = 3e-43
Identities = 80/202 (39%), Positives = 127/202 (62%), Gaps = 1/202 (0%)
Frame = +1
Query: 70 FPGIVIIIILAEFCERFSYSGMRAFLTLYLRSKLGYTDDGATETYHVFSTLVYVFPIIGG 249
+P V ++ EFCERFS+ GM+ L +YL ++ ++ AT YH+F+ + Y+ P+IG
Sbjct: 13 YPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGS 72
Query: 250 ILADNYLGKFRTILYMMFVYAAGNILVAITAIPHFALPGR-LCTLIGLFMITVGTGGIKP 426
I+AD+ G+F+ ILY +Y G++L+++ A+P + P R GLF+I TG IKP
Sbjct: 73 IMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGLFVIAFATGCIKP 132
Query: 427 CVTAFGGDQFKIPEQESHLAAYFSIMYFNLCVGSLIAKTVSPIMRSEVHCFGEKDCYSLA 606
CV+AF DQF +Q+ + +FS YF + GSL A ++PI+R V CFG C+ LA
Sbjct: 133 CVSAFAADQF-TEDQKDLRSQFFSFFYFAINGGSLFAIIITPILRGRVQCFGNAHCFPLA 191
Query: 607 FGAPGLVVLMSIVIFVSAKNKY 672
FG PG+++L++++ F+ + Y
Sbjct: 192 FGVPGVLMLLALIQFLMGWSMY 213
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 379 LIGLFMITVGTGGIKPCVTAFGGDQFKIPEQE-SHLAAYFSIMYFNLCVGSLIAKTVSPI 555
+I ++ VG G CV + G I ++ A+Y +I+ F L + ++ +T+ +
Sbjct: 392 VIDEILLIVGLAG--ECVYSCAGMDLYINDKMIKEPASYITIVSFTLRITEVLVQTIFIL 449
Query: 556 MRSEVHCFGEKDCYS 600
+ + + C+ + +CY+
Sbjct: 450 IATRMRCYTQTNCYT 464
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 642 YRHKHN*SGSTKSQRITIFLSETMYLGSHDGRHGLRNETPHTEI--KIHYTEIRSE 481
YR K + S S+ R T F+SET+ + DG GL ETP + +IH+ ++
Sbjct: 544 YRPKSSTSTSSCFAR-TSFVSETLKTSADDGDKGLNKETPRSPCLKRIHFQRTEAQ 598
>U41996-1|AAA83471.2| 306|Caenorhabditis elegans Serpentine
receptor, class sx protein22 protein.
Length = 306
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 253 LADNYLGKFRTILYMMF--VYAAGNILVAITAIPHFALPGRLCTLIGL 390
+ D L + ++Y++F + GN+ + I + +L R C LIG+
Sbjct: 1 MVDPLLSLLKIVVYIIFATIGVFGNLAIVIITFKYKSLQSRCCVLIGI 48
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 552 GRHGLR-NETPHTEIKIHYTEIRSEMALLFRYFELISSKSGHAGLYASRAYCYHEQTD 382
G G+R N H+ E + E + EL+S GHAG Y A Y E+TD
Sbjct: 175 GTEGVRFNFDVHSLTMKVNPEAKHESEKFTWHSELVSQNEGHAGRYRLEA-TYDEKTD 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,809,798
Number of Sequences: 27780
Number of extensions: 399568
Number of successful extensions: 1034
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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