Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30c23
         (356 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p pro...    30   0.75 
AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA...    30   0.75 
AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p pro...    30   1.00 
AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10....    30   1.00 
AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB...    30   1.00 
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB...    30   1.00 
AE013599-3070|AAF46624.1|  418|Drosophila melanogaster CG15226-P...    28   3.0  
M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase p...    27   7.0  
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro...    27   7.0  
BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p pro...    27   7.0  
BT001632-1|AAN71387.1|  739|Drosophila melanogaster RE38584p pro...    27   7.0  
AY069386-1|AAL39531.1|  100|Drosophila melanogaster LD09564p pro...    27   7.0  
AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p pro...    27   7.0  
AE014297-3844|AAF56499.2|  883|Drosophila melanogaster CG31094-P...    27   7.0  
AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-P...    27   7.0  
AE014297-3703|AAN14037.1|  126|Drosophila melanogaster CG31112-P...    27   7.0  
AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB...    27   7.0  
AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA...    27   7.0  

>AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p
           protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 219 KCLNLHIDEVLHVRVQSGKTLDSFFVARTYDFKQYSLDHSD 341
           KCLNL +   L   +   KT  S    RTYD K   L  +D
Sbjct: 117 KCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTFND 157


>AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA
           protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 219 KCLNLHIDEVLHVRVQSGKTLDSFFVARTYDFKQYSLDHSD 341
           KCLNL +   L   +   KT  S    RTYD K   L  +D
Sbjct: 117 KCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTFND 157


>AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p
           protein.
          Length = 1308

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 193 CHNLSNQNSSA*ICILMKFYMSVSNQEKHLIASLLPELMILN 318
           C N S +     I IL+KF+ ++ +++KHL+ S + +  + N
Sbjct: 567 CPNQSREQLLEDIMILLKFWQTMRSEKKHLVTSEVGDYDLTN 608


>AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.2
            protein.
          Length = 2160

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 193  CHNLSNQNSSA*ICILMKFYMSVSNQEKHLIASLLPELMILN 318
            C N S +     I IL+KF+ ++ +++KHL+ S + +  + N
Sbjct: 1419 CPNQSREQLLEDIMILLKFWQTMRSEKKHLVTSEVGDYDLTN 1460


>AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB
            protein.
          Length = 2178

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 193  CHNLSNQNSSA*ICILMKFYMSVSNQEKHLIASLLPELMILN 318
            C N S +     I IL+KF+ ++ +++KHL+ S + +  + N
Sbjct: 1437 CPNQSREQLLEDIMILLKFWQTMRSEKKHLVTSEVGDYDLTN 1478


>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
            protein.
          Length = 2767

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
 Frame = +3

Query: 30   KERTKMIVKNKMYNQLS---VDLINSCPDDIATMLAYTNYSSLSFGNEISISRLRAPMPQ 200
            KE  +++ +N  Y+QL+   VDL       + +ML         FG+    +R  +    
Sbjct: 1161 KEHLQLLSENLSYSQLNATDVDLDLDILCYVISMLHDPQEMMRLFGSLAICNRTASWYSL 1220

Query: 201  LIEPEFKCLNLHIDEVLH----VRVQSGKTLDS 287
              E  FKCLN HID  +      R+QS  TL +
Sbjct: 1221 SGESLFKCLNFHIDPEMRPSMDSRIQSMTTLQT 1253


>AE013599-3070|AAF46624.1|  418|Drosophila melanogaster CG15226-PA
           protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 112 MSSGQELIKSTESWLYILFLT 50
           M+SGQE I++   WLYIL L+
Sbjct: 1   MNSGQEQIRTAIPWLYILALS 21


>M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase
           protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 122 HCCYVIRARVNQVYRKLVIH 63
           +CCY I A++ Q +R  V H
Sbjct: 320 YCCYYIHAKMAQAHRNRVFH 339


>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
           protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 HVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTA 350
           H R ++ +   S  +AR +D ++ +LDH + T+
Sbjct: 548 HTRCKASEGHASLLLARRHDIRKIALDHMEMTS 580


>BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p
           protein.
          Length = 996

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 HVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTA 350
           H R ++ +   S  +AR +D ++ +LDH + T+
Sbjct: 507 HTRCKASEGHASLLLARRHDIRKIALDHMEMTS 539


>BT001632-1|AAN71387.1|  739|Drosophila melanogaster RE38584p
           protein.
          Length = 739

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 HVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTA 350
           H R ++ +   S  +AR +D ++ +LDH + T+
Sbjct: 309 HTRCKASEGHASLLLARRHDIRKIALDHMEMTS 341


>AY069386-1|AAL39531.1|  100|Drosophila melanogaster LD09564p
           protein.
          Length = 100

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 110 HSNNVGLHQLFITELWK*DKYQQAQGSNATTYRT 211
           + NN+  + +    L K DKY + +GS  TT RT
Sbjct: 23  NQNNINNNLVAFNRLSKDDKYLKRKGSKQTTRRT 56


>AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p
           protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 122 HCCYVIRARVNQVYRKLVIH 63
           +CCY I A++ Q +R  V H
Sbjct: 320 YCCYYIHAKMAQAHRNRVFH 339


>AE014297-3844|AAF56499.2|  883|Drosophila melanogaster CG31094-PA,
           isoform A protein.
          Length = 883

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 HVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTA 350
           H R ++ +   S  +AR +D ++ +LDH + T+
Sbjct: 400 HTRCKASEGHASLLLARRHDIRKIALDHMEMTS 432


>AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-PB,
           isoform B protein.
          Length = 1031

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 252 HVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTA 350
           H R ++ +   S  +AR +D ++ +LDH + T+
Sbjct: 548 HTRCKASEGHASLLLARRHDIRKIALDHMEMTS 580


>AE014297-3703|AAN14037.1|  126|Drosophila melanogaster CG31112-PA
           protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 236 MQIQALEFWFDKLWHWSP 183
           +++   E W D+LW W P
Sbjct: 99  VRLLVFELWLDELWFWEP 116


>AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB,
           isoform B protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 122 HCCYVIRARVNQVYRKLVIH 63
           +CCY I A++ Q +R  V H
Sbjct: 289 YCCYYIHAKMAQAHRNRVFH 308


>AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA,
           isoform A protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 122 HCCYVIRARVNQVYRKLVIH 63
           +CCY I A++ Q +R  V H
Sbjct: 320 YCCYYIHAKMAQAHRNRVFH 339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,200,812
Number of Sequences: 53049
Number of extensions: 276882
Number of successful extensions: 620
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)