Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c22
(449 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2809|AAF49405.1| 78|Drosophila melanogaster CG9669-PA... 58 7e-09
BT011105-1|AAR82771.1| 74|Drosophila melanogaster LP09435p pro... 56 2e-08
AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro... 28 5.0
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA... 28 5.0
BT012475-1|AAS93746.1| 670|Drosophila melanogaster RE15795p pro... 28 6.7
AY069329-1|AAL39474.1| 656|Drosophila melanogaster LD04718p pro... 27 8.8
AE014297-3882|AAF56535.1| 296|Drosophila melanogaster CG14546-P... 27 8.8
AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-P... 27 8.8
AE013599-2817|AAX52695.1| 656|Drosophila melanogaster CG15117-P... 27 8.8
AE013599-2816|AAM68434.1| 670|Drosophila melanogaster CG15117-P... 27 8.8
AE013599-2815|AAF57602.2| 656|Drosophila melanogaster CG15117-P... 27 8.8
AE013599-13|EAA46165.2| 308|Drosophila melanogaster CG40130-PA ... 27 8.8
>AE014296-2809|AAF49405.1| 78|Drosophila melanogaster CG9669-PA
protein.
Length = 78
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 85 IESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRD--MFKELLLSLVA 258
++ M RY SP+NPAVFPH AWFF++ V S K+S++ + KELL+SL A
Sbjct: 1 MDVMQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCA 59
Query: 259 AXXXXXXXXXXXXWVGIYV 315
+ VGIYV
Sbjct: 60 SIFLGFGIVFLLLTVGIYV 78
>BT011105-1|AAR82771.1| 74|Drosophila melanogaster LP09435p
protein.
Length = 74
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 100 RYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRD--MFKELLLSLVAAXXXX 273
RY SP+NPAVFPH AWFF++ V S K+S++ + KELL+SL A+
Sbjct: 2 RYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCASIFLG 60
Query: 274 XXXXXXXXWVGIYV 315
VGIYV
Sbjct: 61 FGIVFLLLTVGIYV 74
>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p protein.
Length = 1380
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 296 SNKNKIPKPENKAATNDKSNSLNISLE 216
SN NK+ KPE KA + N LN L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314
>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
protein.
Length = 1380
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 296 SNKNKIPKPENKAATNDKSNSLNISLE 216
SN NK+ KPE KA + N LN L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314
>BT012475-1|AAS93746.1| 670|Drosophila melanogaster RE15795p
protein.
Length = 670
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 6 SLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 125
+LS + IG VFYSVS S NE+ N + ++ +K G
Sbjct: 248 NLSKDATIGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 287
>AY069329-1|AAL39474.1| 656|Drosophila melanogaster LD04718p
protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 6 SLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 125
+LS + +G VFYSVS S NE+ N + ++ +K G
Sbjct: 234 NLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273
>AE014297-3882|AAF56535.1| 296|Drosophila melanogaster CG14546-PA
protein.
Length = 296
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 305 PTHSNKNKIPKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVR 138
PT N+N+ +K + + S S N + +V + + T V+N PIP K +R
Sbjct: 236 PTRFNQNQ---HASKVSRSSSSRSSNHRQDNIVCLPAMTYPPYVRNCPIPRQKLIR 288
>AE013599-3384|AAF46837.1| 775|Drosophila melanogaster CG10955-PA
protein.
Length = 775
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 308 IPTHSNKNKIPKPENKAATNDKSNSLNI 225
+P N N +PKP +K A SLN+
Sbjct: 738 VPLPVNTNSVPKPASKPAETVSKRSLNL 765
>AE013599-2817|AAX52695.1| 656|Drosophila melanogaster CG15117-PC,
isoform C protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 6 SLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 125
+LS + +G VFYSVS S NE+ N + ++ +K G
Sbjct: 234 NLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273
>AE013599-2816|AAM68434.1| 670|Drosophila melanogaster CG15117-PB,
isoform B protein.
Length = 670
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 6 SLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 125
+LS + +G VFYSVS S NE+ N + ++ +K G
Sbjct: 248 NLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 287
>AE013599-2815|AAF57602.2| 656|Drosophila melanogaster CG15117-PA,
isoform A protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 6 SLSLSSFIGFVFYSVSF*NSHKNESRN*INDPVHVANKPG 125
+LS + +G VFYSVS S NE+ N + ++ +K G
Sbjct: 234 NLSKDATVGEVFYSVSVNGSAANEADNVLQIQANLYDKDG 273
>AE013599-13|EAA46165.2| 308|Drosophila melanogaster CG40130-PA
protein.
Length = 308
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 188 SFTKLQVLKPQEICSKSYFYHWWPPYFLVSEFYSC 292
S+ L +L + S S F +W P++ S F+ C
Sbjct: 59 SYRSLLLLGTTALYSSSTFVYWGSPFYYRSNFFFC 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,207
Number of Sequences: 53049
Number of extensions: 357951
Number of successful extensions: 757
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -