Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c19
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 254 6e-69
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 177 9e-46
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 169 3e-43
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 152 5e-38
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 142 3e-35
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 119 4e-28
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 77 2e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 5e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 70 3e-13
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 70 3e-13
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 68 1e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 64 1e-11
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 64 1e-11
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 64 2e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 60 4e-10
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 59 6e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 58 1e-09
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 45 8e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.036
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.45
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.0
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 1.4
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.1
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 5.5
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 5.5
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 7.3
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 7.3
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 25 9.6
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 254 bits (623), Expect = 6e-69
Identities = 117/144 (81%), Positives = 127/144 (88%)
Frame = +2
Query: 224 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 403
M TIKCVVVGDGAVGKTCLLISYTTNKFPS+YVPTVFDNYAVTVMIG EPYTLGLFDTAG
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 404 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 583
QEDYDRLRPLSYPQTDVFLVCFSV SP+SFENVKEKW PE+ HH P L+VGTQIDLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120
Query: 584 DDSATMEKLAKIKQKPVSLEQGEK 655
DD + +KLA+ Q P++ EQGE+
Sbjct: 121 DDPSVQQKLARQHQHPLTHEQGER 144
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 177 bits (432), Expect = 9e-46
Identities = 78/139 (56%), Positives = 101/139 (72%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 415
K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 416 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 595
DRLRPLSYP + V L+CFSV +P S +NV+EKW+ E+ H P LLVG ++DLR+D
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPK 127
Query: 596 TMEKLAKIKQKPVSLEQGE 652
T+E+L+K QKP++ E+G+
Sbjct: 128 TIEELSKTSQKPITFEEGQ 146
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 169 bits (411), Expect = 3e-43
Identities = 76/139 (54%), Positives = 97/139 (69%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 415
K V+VGDGA GKTCLLI ++ FP YVPTVF+NY V + G L L+DTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 416 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 595
DRLRPLSYP + V L+CF+V SP S +NV+EKW+ E+ H P LLV + DLR+D
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPK 127
Query: 596 TMEKLAKIKQKPVSLEQGE 652
+E+L+K Q PV+ E+G+
Sbjct: 128 IIEELSKTNQHPVTTEEGQ 146
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 152 bits (368), Expect = 5e-38
Identities = 72/141 (51%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIG--GEPYTLGLFDTAGQE 409
K VVVGDG GKTCLLI +++ FP YVPTVF+NY + G + L L+DTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 410 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDD 589
+YDRLRPLSYP ++V L+CFS+ P+S NV EKW PE+ H +TP +LVG + DLR D
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 590 SATMEKLAKIKQKPVSLEQGE 652
E L PV+ +Q +
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQ 156
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 142 bits (345), Expect = 3e-35
Identities = 68/139 (48%), Positives = 89/139 (64%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 415
K VVVGDGA GKT LL +T FP+EYVPTVF+NY + G+ L L+DTAGQE+Y
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69
Query: 416 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDSA 595
+RLRP+SY + + LV F++ SP S ENV KW+ EI PF+LVG + DLR D
Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPV 129
Query: 596 TMEKLAKIKQKPVSLEQGE 652
+E++ + Q V +Q E
Sbjct: 130 AIEEMRRRNQNFVKSQQAE 148
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 119 bits (286), Expect = 4e-28
Identities = 55/116 (47%), Positives = 74/116 (63%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 415
K V++GDGA GKT LL +T FP Y PT+F+NY + + G L L+DTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 416 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLR 583
D+LR LSY T V ++CF+V S S ENV KW+PE++ + +LV + DLR
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLR 130
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 77.0 bits (181), Expect = 2e-15
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Frame = +2
Query: 224 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 403
++ K VVVGDG VGK+ L I + F EY PT+ D+Y I GE L + DTAG
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65
Query: 404 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 580
QE+Y +R + FL+ +++ S SSF+ + + + + T P +LV + DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 581 RDD----SATMEKLAK 616
+ A E+LAK
Sbjct: 126 EAERVVSRAEGEQLAK 141
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 75.8 bits (178), Expect = 5e-15
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Frame = +2
Query: 233 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 409
+K V++GD VGKTCL+ + KF EY T+ D V++ + TL L+DTAGQE
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 410 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT----PFLLVGTQID 577
+ L Y D ++ ++V + SF++V E W E + + PF++VG QID
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 70.1 bits (164), Expect = 3e-13
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +2
Query: 233 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 409
IK +++GD VGK+CLL+ ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 410 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-LLVGTQIDLRD 586
+ + Y L+ + V SF+NV+ W + H + + +L+G + D D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHASENVYKILIGNKCDCED 128
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 69.7 bits (163), Expect = 3e-13
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 412
K +++GD VGK+CLL+ + + + Y+ T+ ++ + T + G+ L ++DTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 413 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQ-QKTPFLLVGTQIDLRDD 589
+ + Y ++ + V SF NVK+ W+ EI + + LLVG + D+ D
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 590 SATMEKLAK 616
+AK
Sbjct: 129 KVVEYSVAK 137
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 67.7 bits (158), Expect = 1e-12
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +2
Query: 221 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDT 397
K +K +++G+ VGKT ++ Y KF +Y T+ ++ V++ + TL L+DT
Sbjct: 5 KKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDT 64
Query: 398 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---KEKWVPEITHHQQKT-PFLLVG 565
AGQE + L Y D ++ + V + SFE + +++++ + + +T PF+L+G
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124
Query: 566 TQIDLRDDSATMEK 607
++D+ + + K
Sbjct: 125 NKVDVEEQKRMVSK 138
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 64.5 bits (150), Expect = 1e-11
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 415
+ V+G +VGK+ L + Y N F Y PT+ + ++ + G+ + + DTAGQ++Y
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 416 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HQQKTPFLLVGTQIDLRDDS 592
L +++ +S+ S SSFE VK + H + P ++VG + DL
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQR 127
Query: 593 ATMEKLAK 616
A + K
Sbjct: 128 AVTAEEGK 135
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 64.5 bits (150), Expect = 1e-11
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 412
K V++GD VGK+ LL+ +T N+F E T+ +A +++ + ++DTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 413 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDL 580
Y + Y L+ + + SSF+NV +W+ E+ H +LVG + DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL 127
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 64.1 bits (149), Expect = 2e-11
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +2
Query: 224 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 400
++ K V +G+ +VGKT L+ + ++F + Y T+ D + T+ + L L+DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 401 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQID 577
GQE + L P + V ++ + + + +SF N EKW+ ++ +LVG + D
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVIIVLVGNKTD 127
Query: 578 LRDDSATMEKLAKIKQKPVSL 640
L D ++ + K K + +
Sbjct: 128 LADKRQVTQEEGEKKAKELKI 148
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 59.7 bits (138), Expect = 4e-10
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 230 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 406
T K V+VGDG GKT + + T +F +Y+ T+ + + + ++DTAGQ
Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQ 68
Query: 407 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 586
E LR Y Q ++ F V S +++NV W ++ + P +L G ++D+++
Sbjct: 69 EKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKE 127
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 58.8 bits (136), Expect = 6e-10
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = +2
Query: 236 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--LGLFDTAGQE 409
K V++GD AVGK+ L++ + ++F T+ + + E + L ++DTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 410 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRD 586
Y L P+ Y + +V + + +S E K W+ E+ + L G ++DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAK-SWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 587 DSATMEK 607
+ +EK
Sbjct: 135 ERRAVEK 141
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 57.6 bits (133), Expect = 1e-09
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 230 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 406
TIK ++GD ++GKT L+++Y F E T+ N+ T+ I T ++D GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 407 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 577
++ + P+ L F + S+ ++KE W + + +L+GT+ D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE-WYRQARGFNKTAVPILIGTKYD 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 45.2 bits (102), Expect = 8e-06
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +2
Query: 233 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEP--YTLGLFDT 397
+K V+ G GK+CLL + N++ + TV F + ++V +G + L ++DT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 398 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQI 574
AGQE + + Y ++ + V + SFE + W+ +I T +L G++
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLAGSKS 128
Query: 575 DLRD 586
DL++
Sbjct: 129 DLQN 132
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 33.1 bits (72), Expect = 0.036
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +2
Query: 239 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 418
C VVG + GKT LL S+ N + P N +V L L + G+ D D
Sbjct: 424 CFVVGSKSCGKTALLSSFINNN-TNRLTPNTVVN---SVEFQSTQRYLVLSE-IGETDLD 478
Query: 419 RL-RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDL 580
L P S D+ + + +P+SF + + + QK P + T+ DL
Sbjct: 479 ILAEPKSLEACDILCLLYDSSNPNSFSFIAN--LLNLYPDLQKIPCVFAATKADL 531
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 0.45
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 200 EETTNCLKMQTIKCVVVGDGAVGKTCLL 283
E C+ + C++VGD A GKTC+L
Sbjct: 1860 ESVITCINKKW-PCILVGDTATGKTCIL 1886
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 622 FYFSKFLHCSRIIAQVYLRPNQQ-KRCLLLMMSYFRDPLFLYIFK 491
FYF + L C + Q+YL N + +C+ + S+ D YI K
Sbjct: 1111 FYFCEPLECVETLVQIYLENNVECCQCIWDIFSFLSDSEPQYIVK 1155
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 233 IKCVVVGDGAVGKTCLLISY----TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 400
I +VVG+ ++GKT + S+ TN P + + F + T+ G + + L + DT
Sbjct: 119 INLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMD--FVEHKATLSDGDQKFNLTIVDTP 176
Query: 401 GQED 412
G D
Sbjct: 177 GFGD 180
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 590 NHRASLFASQPTKTVSSVDDELFQGPTFPLHFQMN*GSQH 471
NH+ S + QP + +SV ++ GPT MN + H
Sbjct: 336 NHQPSYTSEQPMYSTASVPQQISNGPTAVNGLPMNSYTPH 375
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 176 KKIWCTNCEETTNCLKMQTIK-CVVVGDG 259
KK+ C + +NCLK TI+ C+ + G
Sbjct: 29 KKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 243 THFIVCIFKQLVVSSQFVHQIFFYYRD 163
+H I +F QL+ + + H + Y+RD
Sbjct: 117 SHLIKTVFLQLISAVEHCHSVGIYHRD 143
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 255 SPTTTHFIVCIFKQLVVSSQFVHQIFFYYRDYLVHSKL 142
SP TH +VC L S F+ + R ++ S L
Sbjct: 254 SPNKTHVVVCSTDDLTAISSFILSSIYKIRKVVIISLL 291
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 452 VFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLV 562
V L CF + P SF W+ I+H LLV
Sbjct: 1740 VILECFLAIQPRSFPAFTFAWLSLISHSYLLPKVLLV 1776
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 234 IVCIFKQLVVSSQFVHQIFFYYRD 163
+ I KQ++ Q VH+ F YRD
Sbjct: 111 VAMIAKQMITRIQSVHERHFIYRD 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,755,254
Number of Sequences: 5004
Number of extensions: 58498
Number of successful extensions: 179
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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