Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30c19
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   205   1e-54
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   171   2e-44
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            54   4e-09
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    28   0.30 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   4.9  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  205 bits (500), Expect = 1e-54
 Identities = 93/141 (65%), Positives = 109/141 (77%)
 Frame = +2

Query: 233 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 412
           IKCVVVGDG VGKTC+LISYTT+ FP EYVPT FDNY+  +++ G   +LGL+DTAGQED
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 413 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDS 592
           YDRLRPLSYPQTDVFL+C+SV SPSSFENV  KW PEI HH    P +LVGT+IDLR+D 
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDR 126

Query: 593 ATMEKLAKIKQKPVSLEQGEK 655
            T+  LA      +  EQG+K
Sbjct: 127 ETISLLADQGLSALKREQGQK 147


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  171 bits (416), Expect = 2e-44
 Identities = 78/87 (89%), Positives = 85/87 (97%)
 Frame = +2

Query: 395 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQI 574
           +AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH QKTPFLLVGTQI
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 575 DLRDDSATMEKLAKIKQKPVSLEQGEK 655
           DLRD+++T+EKLAK KQKP++LEQGEK
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEK 87


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 54.0 bits (124), Expect = 4e-09
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
 Frame = +2

Query: 221 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDT 397
           K+   K V++G+ AVGK+ L++ +   +F      T+   +   T+ I        ++DT
Sbjct: 21  KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDT 80

Query: 398 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTP---FLLVGT 568
           AGQE Y  L P+ Y      +V + + +  SF   K  WV E+   +Q +P     L G 
Sbjct: 81  AGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAK-TWVKEL--QRQASPNIVIALAGN 137

Query: 569 QIDLRDDSATMEKLAK 616
           + DL +      + AK
Sbjct: 138 KADLANSRVVDYEEAK 153


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 421 PVIIFLTCSIKKT*SVRFTSNHDSDCVVIKYSWNIL 314
           P  +F TC   +    RFT  H  D  V++ + N++
Sbjct: 32  PKAVFFTCMDSRMIPTRFTETHVGDMFVVRNAGNLV 67


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 394 YCRSGRL*QAKTTELSSNRCFPCMLQCCEP 483
           YC  G     +T  L SNRC P   + C P
Sbjct: 92  YCVKGDACSVRTFRLRSNRC-PAYEEVCCP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,874
Number of Sequences: 2352
Number of extensions: 14736
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)