Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c07
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 80 2e-15
04_03_0305 - 14125193-14125421,14125666-14127104 79 3e-15
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 77 1e-14
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 66 2e-11
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 63 2e-10
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 61 7e-10
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 54 8e-08
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 53 2e-07
07_01_1136 + 10668637-10669665,10670259-10670282 51 1e-06
02_05_1267 + 35342770-35343842,35344163-35344256,35344391-35344498 50 2e-06
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 47 1e-05
03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783,180... 45 5e-05
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 44 8e-05
04_04_1635 - 34943881-34945233,34945321-34945524 44 1e-04
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 43 2e-04
07_03_1439 - 26556398-26556418,26556700-26557743 40 0.001
03_01_0213 + 1685862-1686059,1686194-1687732 40 0.002
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 37 0.013
09_06_0236 - 21781508-21783043,21783307-21783504 36 0.039
03_01_0241 - 1866625-1868082,1868892-1869080 34 0.12
03_01_0240 - 1862699-1864186,1864245-1864442 33 0.21
12_02_0357 + 17941898-17943691 31 0.64
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 25 0.83
03_02_0731 - 10786122-10787018,10787859-10788449,10788659-107887... 31 1.1
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 30 1.5
01_06_0257 + 27932119-27932187,27932371-27932470,27932560-279326... 30 1.5
08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252 29 2.6
03_02_0004 - 4869853-4871106 29 2.6
12_02_1255 + 27360958-27362682 29 3.4
10_02_0152 - 5902554-5903058,5904171-5904670 29 4.5
04_04_1486 + 33918611-33918955 29 4.5
01_07_0314 - 42688284-42688517,42688587-42688655,42688881-426890... 29 4.5
12_02_1256 - 27366282-27368021 28 5.9
08_01_0214 - 1710317-1710443,1710839-1711047,1711161-1711420,171... 28 5.9
04_01_0533 - 6956275-6956372,6957106-6957232 28 5.9
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 28 7.8
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +2
Query: 272 VISSPYRDVEIPNS-TLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLR 448
V S D+EI NS TL EY + + R + TG YTY + S AA LR
Sbjct: 11 VFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAAGLR 70
Query: 449 RKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVV 628
R V GDVV +L N P+F +G G T+ NP YT HEV RQ + A+++V
Sbjct: 71 R-MGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEVHRQAEAAGARVIV 129
Query: 629 TLPETVAIIKE 661
T V ++E
Sbjct: 130 TEACAVEKVRE 140
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 79.0 bits (186), Expect = 3e-15
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Frame = +2
Query: 266 DNVISSPYRDVEIPNS-TLYEYVWKNLERWPERTMAV-CATTGRGYTYEQGFKLSNTFAA 439
++V S + V +P+ T+ E+V E + +R V A GR YTY + + + FA
Sbjct: 17 EHVFRSRFPPVAVPDGVTVPEFVLDGAEAYADRVALVEAAAGGRSYTYGEVARDTARFAR 76
Query: 440 NLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAK 619
LR VR G VV V LPN+ +P+V++GI+ AG + + +NP A E+++Q+ SEAK
Sbjct: 77 ALR-SVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAK 135
Query: 620 IVVTLPETVAIIKEA 664
+VV +K+A
Sbjct: 136 LVVANEVAFDKVKDA 150
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 272 VISSPYRDVEIPNS-TLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLR 448
V S D+EIP+ TL Y ++ L R + TG Y+Y + +LS AA LR
Sbjct: 15 VFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLR 74
Query: 449 RKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVV 628
R V GDVV +L N P+F +G G T+ NP YT HE+ RQ + A+++V
Sbjct: 75 R-LGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIV 133
Query: 629 T 631
T
Sbjct: 134 T 134
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +2
Query: 260 SADNVISSPYRDVEIPNST-LYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFA 436
S + + S +D+ I N+ L+ Y ++ L R + TG TY +LS A
Sbjct: 16 SPEIIFRSKLQDIAITNTLPLHRYCFERLPEVAARPCLIDGATGGVLTYADVDRLSRRLA 75
Query: 437 ANLRRK-FQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSE 613
A LRR +R G VV +L N P+F L G +T+ NP+ T HE++ QL +
Sbjct: 76 AALRRAPLGLRRGGVVMSLLRNSPEFVLSFFAASRVGAAVTTANPMSTPHEIESQLAAAG 135
Query: 614 AKIVVT 631
A +V+T
Sbjct: 136 ATVVIT 141
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 263 ADNVISSPYRDVEIPNST-LYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAA 439
A V S D++IP+ L+EY + P+ + A TGR YT+ + L AA
Sbjct: 24 AVTVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAA 83
Query: 440 NLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAK 619
L R V GD V V+L N +F + G + T+ NP T E+ +Q S K
Sbjct: 84 ALHR-LGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANPFCTPQEIHKQFKASGVK 142
Query: 620 IVVT 631
+++T
Sbjct: 143 LILT 146
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 61.3 bits (142), Expect = 7e-10
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 272 VISSPYRDVEIPNST-LYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLR 448
V S D+ IP+ L++YV++ L +R + TG ++ LS AA L
Sbjct: 9 VFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGLS 68
Query: 449 RKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVV 628
V G V ++LPN +F + + G + T+ NP++T E+ +Q+ S A +VV
Sbjct: 69 -SIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIAKQVAASGATVVV 127
Query: 629 TLPETVA 649
T P VA
Sbjct: 128 TEPAFVA 134
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +2
Query: 305 PNSTLYEYVWKNLERWPERT-MAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVV 481
P +L + + + + P +A A GR T+ + + A L + VR GD V
Sbjct: 30 PGLSLTDLLLRRADACPSAVALADAAAGGRALTFAELRSAVLSTAVALSSRAGVRPGDAV 89
Query: 482 AVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLPETV 646
++ PN +P+ + G + T++NP YT E+ +Q+ + AK+V+T+ V
Sbjct: 90 LLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALV 144
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/103 (27%), Positives = 45/103 (43%)
Frame = +2
Query: 353 PERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGI 532
P R V A TG +Y + A L +R GDV V+ P+ + P++ +
Sbjct: 60 PGRPALVDAATGIAISYPSFLAAVRSLAGGLWCSLGLRPGDVALVVAPSRLEVPVLDFAL 119
Query: 533 LEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLPETVAIIKE 661
+ G +++ NP+ T E Q+ LS + PE A + E
Sbjct: 120 MSIGAVVSPANPVSTPEEYAHQVALSRPVVAFAAPEVAAKLPE 162
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/97 (28%), Positives = 43/97 (44%)
Frame = +2
Query: 353 PERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGI 532
P V A TG +++ A LR + +R GDV V+ P D P++ +
Sbjct: 59 PANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVLYFAL 118
Query: 533 LEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLPET 643
L G +++ NP T EV R + LS A + + T
Sbjct: 119 LSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSST 155
>02_05_1267 + 35342770-35343842,35344163-35344256,35344391-35344498
Length = 424
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +2
Query: 428 TFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVL 607
+ A+ LR +R GD V V+ PN P + +G+L AGG++ + +P TA EV
Sbjct: 65 SLASGLRFGLGLRRGDAVLVLSPNSLLLPPIVLGVLAAGGVVVAADPGSTAEEVATVARS 124
Query: 608 SEAKIVVTLPE 640
S A +VV PE
Sbjct: 125 SGAVVVVAAPE 135
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/99 (26%), Positives = 51/99 (51%)
Frame = +2
Query: 305 PNSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVA 484
P+ +L +++ +L ++ V A T + +L ++ AA LRR+ + G +V
Sbjct: 36 PSLSLVPHLFSHLPLH-HHSLLVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVL 94
Query: 485 VMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQL 601
++LPN FP+ + +L G + T++NP E+ +L
Sbjct: 95 LLLPNSLTFPVAFLAVLATGAVATTMNPSSAPAEIAARL 133
>03_01_0228 +
1802038-1803265,1804207-1804245,1804638-1804783,
1804891-1804958,1805045-1805147,1805287-1805400
Length = 565
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 371 VCATTGRGYTYEQGFK-LSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGG 547
V A TGR T+ + ++ ++ +A +R G V ++ PN FP+ + + G
Sbjct: 55 VDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGA 114
Query: 548 IITSINPIYTAHEVQRQLVLSEAKIVVTLPETVAIIKEA 664
++T+ NP+ T E+ +Q+ + + T E + + A
Sbjct: 115 VLTTANPLNTPAEIAKQVADARPVLAFTTRELLPKLPRA 153
>04_04_1568 -
34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/93 (25%), Positives = 47/93 (50%)
Frame = +2
Query: 395 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIY 574
+T+ Q + A+ L + GDVV+V+LPN+P + + +G ++ SIN
Sbjct: 40 FTWSQTHRRCLRLASALVSSLGISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRL 99
Query: 575 TAHEVQRQLVLSEAKIVVTLPETVAIIKEACKM 673
A V L S +K++ P + ++++A ++
Sbjct: 100 DARTVSVLLRHSGSKLIFVDPALLPVLRDALRL 132
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 419 LSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQ 598
L + AA L V G VVA+ PN + ++ + ++ A + +NP YT E +
Sbjct: 39 LVDAAAARLAADAGVLPGHVVALAFPNTVELVIMFLAVIRARAVAAPLNPAYTQEEFEFY 98
Query: 599 LVLSEAKIVVTLPE-TVAIIKEACKM 673
L S A++++T PE VA A K+
Sbjct: 99 LSDSGARLLITNPEGNVAAQAAASKL 124
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = +2
Query: 371 VCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGI 550
V A TG +Y A L +R GDV V+ P+ D ++ ++ G +
Sbjct: 79 VDAATGIAVSYPAFVARVRFLAGGLWCSLGLRPGDVALVVSPSCLDVAVLYFALMSIGVV 138
Query: 551 ITSINPIYTAHEVQRQLVLSEAKIVVTLPETVA 649
++ NP TA E Q+ LS I PE A
Sbjct: 139 VSPANPASTADEYAHQVRLSRPAIAFVAPEVAA 171
>07_03_1439 - 26556398-26556418,26556700-26557743
Length = 354
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 359 RTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILE 538
R V A+TG ++ G + + A +R G V ++ PN FP +++ +L
Sbjct: 50 RPAFVDASTGAALSFA-GLRALSLRVARALAAAGLRRGRVALLLSPNSLHFPALSLAVLS 108
Query: 539 AGGIITSINPIYTAHEVQRQ 598
G ++++ NP+ T E+ RQ
Sbjct: 109 LGAVLSAANPLLTPDELARQ 128
>03_01_0213 + 1685862-1686059,1686194-1687732
Length = 578
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = +2
Query: 395 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIY 574
+T+ Q + A++L VR+ DVV+V+ PN+P + + AG ++ +IN
Sbjct: 40 FTWSQTYARCRRLASSLL-SLGVRNHDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRL 98
Query: 575 TAHEVQRQLVLSEAKIVVTLPETVAIIKEACKM 673
A V L SEAK+ + V + +A ++
Sbjct: 99 DARAVAGILRHSEAKVFFVDYQYVRLASDALQI 131
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +2
Query: 395 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIY 574
YT+ + ++ A+ L ++ V G VAV+ PN+P G+ +G ++ +N
Sbjct: 53 YTWAETYRRCRRLASALAQR-SVGPGCTVAVIAPNVPALYEAHFGVPMSGAVVNCVNIRL 111
Query: 575 TAHEVQRQLVLSEAKIVVTLPETVAIIKEACKM 673
A + L S A++V+ E + +E+ K+
Sbjct: 112 NAETIAFLLDHSVAEVVMVDQEFFTLAEESLKI 144
>09_06_0236 - 21781508-21783043,21783307-21783504
Length = 577
Score = 35.5 bits (78), Expect = 0.039
Identities = 31/131 (23%), Positives = 55/131 (41%)
Frame = +2
Query: 278 SSPYRDVEIPNSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKF 457
S P RD + ++ + + +RT V T +T+ Q AA L+
Sbjct: 3 SLPKRDANYVPLSPITFLHRAASVYADRTSVVYGATS--FTWRQTHHRCLRLAAALQ-SL 59
Query: 458 QVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLP 637
V DVV+V+ PN P + + AG ++ +IN A V + +E K++
Sbjct: 60 AVSKNDVVSVIAPNTPALYEMHFAVPMAGAVLNAINTRLDAANVAAIVRHAEPKVLFVDY 119
Query: 638 ETVAIIKEACK 670
+ + + +A K
Sbjct: 120 QFIRVATDALK 130
>03_01_0241 - 1866625-1868082,1868892-1869080
Length = 548
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +2
Query: 356 ERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGIL 535
+R VC R YT+ + AA L + GDVVAV+ PN+P + +
Sbjct: 30 DRAAVVCGE--RRYTWREARGRCVRLAAALAAR-----GDVVAVLSPNVPAMYELHFAVP 82
Query: 536 EAGGIITSINPIYTAHEVQRQLVLSEAKI 622
AG ++ + N + A + L S AK+
Sbjct: 83 MAGAVLCTFNARHDAAMISTLLSHSGAKV 111
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +2
Query: 479 VAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLPETVAIIK 658
VAV+ NIP + + AGG++ ++N + A V L SEAK+ + + +A+
Sbjct: 78 VAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAMVSVLLRHSEAKVFLVESQFLAVAH 137
Query: 659 EACKM 673
+A ++
Sbjct: 138 DALRL 142
>12_02_0357 + 17941898-17943691
Length = 597
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -2
Query: 492 SITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS---GHLSKFF---- 334
SI S WN+ R A L + Y +PRP +A TA++L+ GHL F
Sbjct: 375 SINTFVSLISIWNYAGRVGAGYLSEMLLARYRFPRP-LALTAVLLASCVGHLLIAFGVPG 433
Query: 333 HTYSYSVLLG 304
Y+ SV++G
Sbjct: 434 SLYAASVIIG 443
>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
Length = 722
Score = 25.0 bits (52), Expect(2) = 0.83
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 568 DLYSA*SPKATCIIRSQNRGYIAGDSGHYKG 660
D Y+ S + C+ + + GYI S HY G
Sbjct: 288 DNYACRSSNSFCVNATSSPGYICKCSDHYDG 318
Score = 24.6 bits (51), Expect(2) = 0.83
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 511 SPCDHGNIRSWRHYNIYKPDLY 576
+PC +G I YN K DLY
Sbjct: 232 NPCSYGMIVQKNWYNFTKEDLY 253
>03_02_0731 -
10786122-10787018,10787859-10788449,10788659-10788740,
10789914-10790107
Length = 587
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 479 VAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLPETVAIIK 658
VAV+ PNIP G+ AG ++ +N A V L S A++V+ E ++ +
Sbjct: 93 VAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEVVMVDQEFFSLAE 152
Query: 659 EACKM 673
++ ++
Sbjct: 153 DSLRI 157
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -3
Query: 185 RLCSSDHVKQITDSFQTI*FLMHYLKQL*NTYKIKMIQYCNKK*ILLSRRAVRLTPFQ 12
++C+ V ++ D+ + L+ YLK NT + +C K+ L +R + PFQ
Sbjct: 167 QICNRPDVVEVWDATASDPSLLVYLKSYRNTVPVPR-HWCQKRKFLQGKRGIEKQPFQ 223
>01_06_0257 +
27932119-27932187,27932371-27932470,27932560-27932666,
27933619-27933621,27933833-27933866,27934081-27934229,
27934676-27934822,27935019-27935129,27935548-27935647,
27936115-27936165,27937297-27937334,27937448-27937540,
27937744-27937827,27939101-27939262
Length = 415
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 236 LIRKQSVWSADNVISSPYRDVEIPNSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGF 415
L+R++ D +I + D +I + TLY+ +WK+ ER + + TG G T +
Sbjct: 323 LVRERGPVETDKIIDTTILDKQIVHGTLYK-LWKDDYIDTER---ILSGTGTGNTQYFVW 378
Query: 416 KLSNTF 433
++ NTF
Sbjct: 379 RVKNTF 384
>08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252
Length = 570
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -2
Query: 459 WNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS--GHLS 343
WNFL R L Y YPR + TA V GH S
Sbjct: 383 WNFLGRIGGGYFSELIVKDYAYPRAIALATAQVFMAFGHFS 423
>03_02_0004 - 4869853-4871106
Length = 417
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = -2
Query: 561 IDVIMPPASNIPMVTRGKSGMFGSITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPV 382
+D++ P + GS+ A + W FLL A V L+PC+ P
Sbjct: 210 VDILTTATEASPTASATLQWTHGSLNALS-----WGFLLPVGAAVARYLRPCASTGPAWF 264
Query: 381 VAQTAIVLSGH 349
A AI +G+
Sbjct: 265 YAHAAIQATGY 275
>12_02_1255 + 27360958-27362682
Length = 574
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = -2
Query: 492 SITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVL--SGHLSKFF----H 331
SI S WN+L R +A Y RPVV ++L +GHL F
Sbjct: 372 SIATLVSLISIWNYLGRVSAGFASDALLSRYGISRPVVVTGVLLLTVAGHLLVAFGVPGS 431
Query: 330 TYSYSVLLG 304
Y+ SVL+G
Sbjct: 432 LYAASVLIG 440
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 446 RRKFQVRDGDVVAVMLP 496
RR+F+ RDGDVV LP
Sbjct: 53 RRRFEARDGDVVVASLP 69
>04_04_1486 + 33918611-33918955
Length = 114
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 448 KEVPSPRWRRRGCDATKHPRFSPCDHGNIRSWRHY 552
KE SP RR D H PC G +R WR +
Sbjct: 13 KERHSPTVRRNDHDGGCHDTNQPCHVGVVRRWRSW 47
>01_07_0314 -
42688284-42688517,42688587-42688655,42688881-42689001,
42689196-42689371,42689473-42689574,42690376-42691320
Length = 548
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 143 NCLLFA*RDLRNKVWRMLSKNFIKRWVQSSKLIRKQSVWSADNVISSPYRDVEIPNSTL 319
NCLL ++R+ ++ +L +F +W Q ++ S A ++ PY EI S +
Sbjct: 418 NCLLVTNDEMRDHIFELLGSSFFPKWKQRHQVKYTFSKGKAVLMMPPPYSS-EIQESEM 475
>12_02_1256 - 27366282-27368021
Length = 579
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Frame = -2
Query: 492 SITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS--GHLSKFF----H 331
S+ S WN+L R AA + PRP++ ++L+ GHL F
Sbjct: 377 SVATFVSLISIWNYLGRVAAGFASEALLARHRLPRPLILAVVLLLTAPGHLLIAFGVPGS 436
Query: 330 TYSYSVLLGISTSLYGELITLS 265
Y+ SV++G LI S
Sbjct: 437 LYAASVVVGFCFGAAQPLILAS 458
>08_01_0214 -
1710317-1710443,1710839-1711047,1711161-1711420,
1711442-1711534,1711745-1711872,1711958-1712151,
1712288-1712385,1712548-1712658,1712782-1712950,
1713109-1713181,1713311-1713507
Length = 552
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 461 VRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVV 628
VR G VVAV+ N ++ + + + GGII +N ++ E + L L + + +
Sbjct: 53 VRRGHVVAVVAFNSIEYIELFLAVTYIGGIIAPLNYRWSFEEASQALELVQPTVFI 108
>04_01_0533 - 6956275-6956372,6957106-6957232
Length = 74
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 351 GPRGLWRSAPPQAVG 395
GPRGLWR++P VG
Sbjct: 30 GPRGLWRASPELVVG 44
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = -2
Query: 426 LESLKPCSYVYPRPVVAQTAIVLSGHLSKFFHTYSYSVLLGISTSLYGELITLSALQTLC 247
LE L Y VV + A V H KFF S +S+S EL+TL Q L
Sbjct: 3001 LEGLPDKVYTLAAEVVKKLASVAVSH-RKFFSMELASAAQSLSSSAVEELVTLKNTQMLG 3059
Query: 246 L 244
L
Sbjct: 3060 L 3060
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,063,294
Number of Sequences: 37544
Number of extensions: 409394
Number of successful extensions: 1229
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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