Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30c07
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 37 0.015
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 35 0.061
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 33 0.25
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 32 0.43
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 32 0.43
Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 4.0
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 28 5.3
Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine re... 27 9.2
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Frame = +2
Query: 272 VISSPYRDVEIPNSTLYEYVWKNLERWPERTM-AVC----ATTGRGYTYEQGFKLSNTFA 436
V S V++ +T++E +++ AVC TT + Y+ N+ A
Sbjct: 2 VFVSKAASVKLSTTTVHERIFEACRIHASANKDAVCFIDAETTTKKKLYKDVEPTVNSLA 61
Query: 437 ANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEA 616
L K + GDV + PN P+F + + +++ GG +++ + I+T +E+Q Q S
Sbjct: 62 TALV-KLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGAMSNASAIFTDYELQLQFCDSNT 120
Query: 617 KIVVTLPETVAIIKEA 664
IV T + +A I+ A
Sbjct: 121 SIVFTDEDRLARIRRA 136
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +2
Query: 380 TTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITS 559
TT + Y N+ A L K + GDV A PN P+F + + +++ GG +++
Sbjct: 43 TTTKKKLYRDVEPTVNSLATALV-KLGFKPGDVAAQAFPNCPEFLIAMLAVMKCGGAMSN 101
Query: 560 INPIYTAHEVQRQLVLSEAKIVVTLPETVAIIKEA 664
+ I+T +E+Q Q S IV T + +A ++ +
Sbjct: 102 ASAIFTDYELQLQFKDSNTSIVFTDEDRLARVRRS 136
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 473 DVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVT----LPE 640
DV AV+LPN+ + +G GG ++ + ++T +E+QRQ V S AK+V T LP+
Sbjct: 72 DVAAVVLPNVWHYTSFFIGCAINGGAVSGASALFTDYELQRQFVDSRAKVVFTYEDFLPK 131
Query: 641 TVAIIKEA 664
+ +K++
Sbjct: 132 VLLAVKQS 139
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/130 (23%), Positives = 60/130 (46%)
Frame = +2
Query: 275 ISSPYRDVEIPNSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRK 454
+ S R + + ++E +++ P + + +GR TY++ L+N +A NL
Sbjct: 68 VKSTIRGLFKKDRPIHEIFLNQVKQHPNKVAIIEIESGRQLTYQELNALANQYA-NLYVS 126
Query: 455 FQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTL 634
+ GDVVA+ + N DF + +G+ + G + IN + + +S+ K +T
Sbjct: 127 EGYKMGDVVALFMENSIDFFAIWLGLSKIGVVSAFINSNLKLEPLAHSINVSKCKSCITN 186
Query: 635 PETVAIIKEA 664
+ + K A
Sbjct: 187 INLLPMFKAA 196
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 461 VRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVT 631
+ GD + V LPN +PL+ + + G +++ I+ TA E++ L S AK+V T
Sbjct: 55 ISQGDTILVCLPNSIWYPLLFLSCAKIGAVLSGISHESTAGEIKYSLKQSGAKLVFT 111
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/108 (23%), Positives = 47/108 (43%)
Frame = +2
Query: 308 NSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAV 487
N ++E +++ P + + T TY + N +A N + R GDVVA+
Sbjct: 108 NKGIHELFLDIVKKNPNKPAMIDIETNTTETYAEFNAHCNRYA-NYFQGLGYRSGDVVAL 166
Query: 488 MLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVT 631
+ N +F MG+ + G + IN ++ + S+ K ++T
Sbjct: 167 YMENSVEFVAAWMGLAKIGVVTAWINSNLKREQLVHCITASKTKAIIT 214
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 35.5 bits (78), Expect = 0.035
Identities = 26/100 (26%), Positives = 46/100 (46%)
Frame = +2
Query: 293 DVEIPNSTLYEYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDG 472
++ + N TL + + ER P++ V + TYE+ + AA+L + G
Sbjct: 53 NIPLRNETLGQTLRNTTERVPDKEFCVFSKYPIRKTYEEFYHDVRQMAASLYT-LGLEKG 111
Query: 473 DVVAVMLPNIPDFPLVTMGILEAGGIITSINPIYTAHEVQ 592
D V V PN ++ ++ AG I ++NP Y E++
Sbjct: 112 DRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELR 151
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +2
Query: 395 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIY 574
+TY + F+A LR V+ GDVVA+ LP IP+ + + G + + + +
Sbjct: 117 WTYNELHAQVVQFSAVLR-SHGVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGF 175
Query: 575 TAHEVQRQLVLSEAKIVVT 631
+A + ++V + +++VT
Sbjct: 176 SAESLAARVVDARCRVLVT 194
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +2
Query: 395 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINPIY 574
+TY + F+A LR V+ GDVVA+ LP IP+ + + G + + + +
Sbjct: 127 WTYNELHAQVVQFSAVLR-SHGVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGF 185
Query: 575 TAHEVQRQLVLSEAKIVVT 631
+A + ++V + +++VT
Sbjct: 186 SAESLAARVVDARCRVLVT 204
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Frame = +2
Query: 212 KRWVQSSKLIRKQSVWSADNVISSPYRDVEIPNST----LYEYVWKNL----ERWPERTM 367
K+ + + +++ +A++V+ +P R + + L+E V L ++ P++
Sbjct: 25 KKMLYEEPISLEEAALNANDVMVAPSRKSYVHGCSTVPLLFETVGDRLRSAVDQVPDKEF 84
Query: 368 AVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGG 547
+ G TY Q + A L ++ GD + + PN ++ AG
Sbjct: 85 LIFKREGIRKTYSQVATDAENLACGLLH-LGLKKGDRIGIWGPNTYEWTTTQFASALAGM 143
Query: 548 IITSINPIYTAHEVQRQLVLSEAKIVVTLP 637
++ +INP Y + E++ + + ++T P
Sbjct: 144 VLVNINPSYQSEELRYAIEKVGIRALITPP 173
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/99 (20%), Positives = 43/99 (43%)
Frame = +2
Query: 341 LERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLV 520
+++ P++ + G TY Q + A L ++ GD + + PN ++
Sbjct: 31 VDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLH-LGLKKGDRIGIWGPNTYEWTTT 89
Query: 521 TMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLP 637
AG ++ +INP Y + E++ + + ++T P
Sbjct: 90 QFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITPP 128
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/99 (20%), Positives = 43/99 (43%)
Frame = +2
Query: 341 LERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLV 520
+++ P++ + G TY Q + A L ++ GD + + PN ++
Sbjct: 50 VDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLH-LGLKKGDRIGIWGPNTYEWTTT 108
Query: 521 TMGILEAGGIITSINPIYTAHEVQRQLVLSEAKIVVTLP 637
AG ++ +INP Y + E++ + + ++T P
Sbjct: 109 QFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITPP 147
>Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 341 LERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPD-FPL 517
+E +R + VC T E+G K+ + A + + Q D D+ + L IP P
Sbjct: 85 IEAMGDRKLKVCTVTWN--INEKGVKILSHLAQKIAERGQEMDSDIFFISLQEIPSTAPT 142
Query: 518 VTMGILEAGGIITSINPIYTAHEVQRQLVL 607
L + + + +Y +H Q+V+
Sbjct: 143 FHEEALRILEPVLNGHRLYLSHRAWSQMVI 172
>Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 341 LERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPD-FPL 517
+E +R + VC T E+G K+ + A + + Q D D+ + L IP P
Sbjct: 85 IEAMGDRKLKVCTVTWN--INEKGVKILSHLAQKIAERGQEMDSDIFFISLQEIPSTAPT 142
Query: 518 VTMGILEAGGIITSINPIYTAHEVQRQLVL 607
L + + + +Y +H Q+V+
Sbjct: 143 FHEEALRILEPVLNGHRLYLSHRAWSQMVI 172
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 360 LSGHLSKFFHTYSYSVLLGISTSLYGELITLSALQTLC 247
L+ ++S+F H + S+L +S + G L S L+T+C
Sbjct: 2347 LNQYISRFLHEHFGSLLKNLSGPVLGVLGAFSLLRTIC 2384
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 389 RGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPLVTMGILEAGGIITSINP 568
R TYE+ S AN V++GD + + + N ++ L +G G I INP
Sbjct: 113 RCVTYEELVDGSKR-TANYMSHHGVKNGDRILMCMENTVEYVLYQLGGFLLGAIPVLINP 171
Query: 569 IYTAHE 586
+ A E
Sbjct: 172 SHIASE 177
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 484 CDATKHPRFSPCDHGNIRSWRHYNIY 561
CD + +SPC G W++Y+I+
Sbjct: 527 CDVSGSAYYSPCHAGCAMGWKNYSIF 552
>Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical
protein ZK550.3 protein.
Length = 772
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 281 SPYRDVEIPNSTLYEYVWKNLERWP 355
SPYRD+ IP S Y W + +P
Sbjct: 556 SPYRDISIPWSPFYASDWDAADMFP 580
>AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine
receptor, class x protein4 protein.
Length = 349
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +1
Query: 19 GVSRTARRDNNIYFLLQYCIILILYV 96
G + RR+ ++ + Q+C++LI Y+
Sbjct: 211 GEEQKLRRERDVKYAFQFCLLLIFYI 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,303,606
Number of Sequences: 27780
Number of extensions: 352736
Number of successful extensions: 1110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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