Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30c01
         (723 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   306   1e-83
AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    41   8e-04
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    41   8e-04
AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical ...    31   0.63 
U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical pr...    31   0.83 
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  306 bits (751), Expect = 1e-83
 Identities = 140/206 (67%), Positives = 168/206 (81%)
 Frame = +3

Query: 105 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 284
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 285 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAG 464
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSLGQGL VA G
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSLGQGLGVATG 130

Query: 465 MAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNRLGQSEPTS 644
           MAYVGKY D+A YRV+CL+GDGE+AEGS+WE+  FAS YKLDNLV I DVNRLGQS+ TS
Sbjct: 131 MAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVDVNRLGQSQATS 190

Query: 645 LQHQLEVYDARLKAFGLNSLVVDGHD 722
           L H +E Y AR  AFG N+++V+GH+
Sbjct: 191 LGHDVETYKARFAAFGFNAIIVNGHN 216


>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 33/109 (30%), Positives = 49/109 (44%)
 Frame = +3

Query: 396 TPRLNFVDVGTGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFAS 575
           T   NFV + +    Q L  A G AY  K             GDG A+EG    + +FA+
Sbjct: 181 TKERNFVTISSPLTTQ-LPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAA 239

Query: 576 HYKLDNLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHD 722
             K   ++     N    S PTS Q+  +    +  A+GL+++ VDG+D
Sbjct: 240 TLKCP-IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGND 287


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 33/109 (30%), Positives = 49/109 (44%)
 Frame = +3

Query: 396 TPRLNFVDVGTGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFAS 575
           T   NFV + +    Q L  A G AY  K             GDG A+EG    + +FA+
Sbjct: 180 TKERNFVTISSPLTTQ-LPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAA 238

Query: 576 HYKLDNLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHD 722
             K   ++     N    S PTS Q+  +    +  A+GL+++ VDG+D
Sbjct: 239 TLKCP-IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGND 286


>AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical
           protein K08A2.4 protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = -2

Query: 683 LQARVVHFQLMLQRGRLGLPQTVNIEDDDQVVQLVVAGKVQRLPDAALGCLSVAHQAIH 507
           L+  V  +  ML+ GR    +   I+ DD++++ VV  +++++PD   G  +   QA H
Sbjct: 28  LRITVQEYMAMLKSGR----KVYEIKPDDRILKKVVMSEIEKIPDMWAGEKNTNRQAEH 82


>U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical
           protein F23F12.13 protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 381 LEGHPTPRLNFVDVGTGSL--GQGLAVAAGMAYVGKYFDQAPYRVYCLVG 524
           +E  PT ++  + +GT SL    G  +A  MAY+   +  APY V C +G
Sbjct: 416 VECFPT-KIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCSIG 464


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +1

Query: 343 WTS*RTCASWTRTWRATPPRDSTSWTSAPA---PWARGSPWRPAW 468
           W S  T  S   +W A P   STSW +APA    W       P W
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTW 376


>Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 144 QYCRFLVCWRYLLVVQSQHFYLPSFSECIQCLIYFVTKP 28
           +Y   L+C +  L+ QS+HFYL ++S     L Y V  P
Sbjct: 116 KYSYALICEKGNLIPQSEHFYLYAYSGLFNTL-YQVDNP 153


>Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 144 QYCRFLVCWRYLLVVQSQHFYLPSFSECIQCLIYFVTKP 28
           +Y   L+C +  L+ QS+HFYL ++S     L Y V  P
Sbjct: 116 KYSYALICEKGNLIPQSEHFYLYAYSGLFNTL-YQVDNP 153


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 393 PTPRLNFVDVGTGSLGQ--GLAVAAGMAYVGKYFDQAPYRVYCLVG 524
           PT R+  + +GT SL    G  +A  MAY+ + +   PY + C +G
Sbjct: 432 PT-RIRTIGIGTCSLLARIGALLAPQMAYLSEIYPPIPYIIVCSIG 476


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,520,828
Number of Sequences: 27780
Number of extensions: 317527
Number of successful extensions: 994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)