Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30b20
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22181-12|CAA80188.1|  161|Caenorhabditis elegans Hypothetical p...    37   0.016
AY324109-1|AAP85302.1|  161|Caenorhabditis elegans LIN-52 protein.     37   0.016
AF068713-2|AAC17805.1|  347|Caenorhabditis elegans Seven tm rece...    29   4.3  
Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical p...    28   7.4  
Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical p...    28   7.4  
U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z22181-12|CAA80188.1|  161|Caenorhabditis elegans Hypothetical
           protein ZK632.13 protein.
          Length = 161

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 172 GTQEPSWNEGLTKQDYTYMQQLGTLTVSGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNI 351
           G + P  N    K+D   +  +       +   ++ + +  Y LG+EEA++  RGK LN+
Sbjct: 74  GYESPYKNISFLKEDAVTVNTMSHCPADDIAKLIRNIQNSVYTLGIEEARQCRRGKLLNV 133


>AY324109-1|AAP85302.1|  161|Caenorhabditis elegans LIN-52 protein.
          Length = 161

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 172 GTQEPSWNEGLTKQDYTYMQQLGTLTVSGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNI 351
           G + P  N    K+D   +  +       +   ++ + +  Y LG+EEA++  RGK LN+
Sbjct: 74  GYESPYKNISFLKEDAVTVNTMSHCPADDIAKLIRNIQNSVYTLGIEEARQCRRGKLLNV 133


>AF068713-2|AAC17805.1|  347|Caenorhabditis elegans Seven tm
           receptor protein 260 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 504 FEVRNFRLKGKIIHSFSNICKFQKQKKKHFNARTTLTPLEIKYLPLPF*CKYIQVF 337
           F V+ +R   K+I   ++  KF+  +K+ FNA    T + +  + +P    Y  +F
Sbjct: 222 FGVKGYRSMNKLIAQSNSSQKFRSVQKQLFNALVLQTFIPVLLMHIPASAIYFTIF 277


>Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 PMPGTQEPSWNEGLTKQDYTYMQQLG 240
           P PG QEP  +E ++K D T +++ G
Sbjct: 351 PQPGEQEPMRDESVSKSDDTIIEKEG 376


>Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 PMPGTQEPSWNEGLTKQDYTYMQQLG 240
           P PG QEP  +E ++K D T +++ G
Sbjct: 351 PQPGEQEPMRDESVSKSDDTIIEKEG 376


>U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical
           protein C14F11.2 protein.
          Length = 638

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +1

Query: 82  NNVNLTSEEESQCSNDSLTVPG-----VSEFAPMP 171
           NN N    E+S+ S+ SL+ PG     +S+ APMP
Sbjct: 391 NNNNNNDNEKSKLSSSSLSSPGMGKKPISKVAPMP 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,288,278
Number of Sequences: 27780
Number of extensions: 310578
Number of successful extensions: 801
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)