Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30b19
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.6  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   5.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 425  QNHCHYHSSYHHFWI 381
            + HCHY+ +   FW+
Sbjct: 975  KGHCHYYETQTSFWL 989


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 419 HCHYHSSYHHFWIPHP 372
           H  YH+  HH++ P P
Sbjct: 189 HPAYHTGLHHYYQPSP 204


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 419 HCHYHSSYHHFWIPHP 372
           H  YH+  HH++ P P
Sbjct: 189 HPAYHTGLHHYYQPSP 204


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 645 TWQRLWLLKQTIQHSSLFHHL 707
           TW +LWL+    ++ SLF  L
Sbjct: 126 TWTQLWLVTDYHENGSLFDFL 146


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
 Frame = -3

Query: 419 HCHYHSS----YHHFWIPHPLLVFSFDLF*DIPL 330
           H H H S     HH    H  LV   DL  D+PL
Sbjct: 421 HLHNHRSGGGGRHHHHHHHSALVRGMDLMDDMPL 454


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +3

Query: 588 REYHGRASYYLDPLVLVSHTWQRLWLLKQTIQHSSLFHHLI 710
           REY   A+ Y  P++   +  + ++   +    + LFHH++
Sbjct: 524 REYADIANAYYGPVIENFNCDKSIYTAVEVTAGNRLFHHIV 564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,956
Number of Sequences: 2352
Number of extensions: 12443
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)