Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30b18
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   3.7  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   4.9  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         24   4.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   8.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.6  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -3

Query: 162 IYCYVNPAXXXXXXXLHVVKYSSFFLRHFDVYRYEILIIS 43
           IYC+V+P+          + +   FL HF ++ +     S
Sbjct: 35  IYCFVSPSCLECSSVPLFINFIFMFLLHFVLFSFSFPFFS 74


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 4   WIENIDELIYESLRNYENFVSVDIKMS 84
           W E ++E   E L+NY +F+ + I  S
Sbjct: 27  WDEQMNEAAREFLKNYSDFIPMLIGQS 53


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 4   WIENIDELIYESLRNYENFVSVDIKMS 84
           W E ++E   E L+NY +F+ + I  S
Sbjct: 27  WNEQMNEAAREFLKNYPDFIPMLIGQS 53


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 388 WGIEVVSGNAVNWLECVARGQQVTLKPIGRDNDDLVS--TVLLHLPQPKSKDVQTLDIGK 561
           W +   +G   N+L+      Q  ++    D DD     TV++ L Q   +  +  ++G 
Sbjct: 95  WAVGTTAGGCRNYLDTFWHNPQYVIRLDDPDEDDEEGNCTVIIALLQKNRRSRR--NMGV 152

Query: 562 KLVELGFA 585
           + + +GFA
Sbjct: 153 ECLTIGFA 160


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/68 (19%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 229 ASKVPDHFIR-NHEPLKGLYAGVQHSPVRVLVNHKAPIYLPLWHSSKPPLPVKLWGIEVV 405
           A   P+H      E ++ ++A ++H  +++       + +       P +P+++ G+E+ 
Sbjct: 671 AGTTPEHAAAVAEEAVERVHAWMRHH-LQLAPEKTECVMISSLRRGHPEIPIRVGGLEIR 729

Query: 406 SGNAVNWL 429
           S  A+ +L
Sbjct: 730 SKQAIRYL 737


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 320 SITKPQYIYRYGIPVNLH 373
           S TKP  I RY IP+ L+
Sbjct: 193 SYTKPTPIQRYAIPIILN 210


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 54  EFRICRHQNVSKRRR 98
           E +IC+H  V++RR+
Sbjct: 493 ELKICQHDEVTERRK 507


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 497 LLYYCIYLSLRVKMFKH 547
           L+YY   L L+V +FKH
Sbjct: 863 LVYYTYKLELKVWLFKH 879


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,241
Number of Sequences: 2352
Number of extensions: 15077
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)