Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30b18
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF115515-1|AAO06952.1|  277|Homo sapiens MSTP052 protein.              46   1e-04
BC064898-1|AAH64898.1|  294|Homo sapiens C3orf33 protein protein.      46   2e-04
BC042198-1|AAH42198.1|  293|Homo sapiens C3orf33 protein protein.      46   2e-04
AK055701-1|BAB70989.1|  251|Homo sapiens protein ( Homo sapiens ...    45   2e-04
AF118395-1|AAD28559.1|  376|Homo sapiens trans-prenyltransferase...    30   8.5  

>AF115515-1|AAO06952.1|  277|Homo sapiens MSTP052 protein.
          Length = 277

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
 Frame = +1

Query: 166 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 342
           +A AG+ + +  IR  SKF+ +S +P  FIR +  L+G    +  + + +  +    PI 
Sbjct: 27  MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 86

Query: 343 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLHL 516
             L    +  L VKL G+E+  +G A  WL+   +  Q+  ++ +G++N  L   +L++ 
Sbjct: 87  ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWVQLLGKENSALFCYLLVN- 143

Query: 517 PQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNT-IESQIAPALLSAE 660
                    ++++ ++++  G  K    K LK ++ I   +   LL AE
Sbjct: 144 ----KGGYFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAE 188


>BC064898-1|AAH64898.1|  294|Homo sapiens C3orf33 protein protein.
          Length = 294

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
 Frame = +1

Query: 166 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 342
           +A AG+ + +  IR  SKF+ +S +P  FIR +  L+G    +  + + +  +    PI 
Sbjct: 44  MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 103

Query: 343 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLHL 516
             L    +  L VKL G+E+  +G A  WL+   +  Q+   + +G++N  L   +L++ 
Sbjct: 104 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLVN- 160

Query: 517 PQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNT-IESQIAPALLSAE 660
                    ++++ ++++  G  K    K LK ++ I   +   LL AE
Sbjct: 161 ----KGGYFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAE 205


>BC042198-1|AAH42198.1|  293|Homo sapiens C3orf33 protein protein.
          Length = 293

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
 Frame = +1

Query: 166 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 342
           +A AG+ + +  IR  SKF+ +S +P  FIR +  L+G    +  + + +  +    PI 
Sbjct: 43  MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 102

Query: 343 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLHL 516
             L    +  L VKL G+E+  +G A  WL+   +  Q+   + +G++N  L   +L++ 
Sbjct: 103 ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLVN- 159

Query: 517 PQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNT-IESQIAPALLSAE 660
                    ++++ ++++  G  K    K LK ++ I   +   LL AE
Sbjct: 160 ----KGGYFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAE 204


>AK055701-1|BAB70989.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31139 fis, clone IMR322001185. ).
          Length = 251

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
 Frame = +1

Query: 166 LATAGLAISVHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPVRV-LVNHKAPIY 342
           +A AG+ + +  IR  SKF+ +S +P  FIR +  L+G    +  + + +  +    PI 
Sbjct: 1   MAIAGIMLLLRSIRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPII 60

Query: 343 LPLWHSSKPPLPVKLWGIEVV-SGNAVNWLECVARGQQVT-LKPIGRDNDDLVSTVLLHL 516
             L    +  L VKL G+E+  +G A  WL+   +  Q+   + +G++N  L   +L+  
Sbjct: 61  ASLRKEPRGALLVKLAGVELAETGKA--WLQKELKPSQLLWFQLLGKENSALFCYLLV-- 116

Query: 517 PQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNT-IESQIAPALLSAE 660
                    ++++ ++++  G  K    K LK ++ I   +   LL AE
Sbjct: 117 ---SKGGYFSVNLNEEILRRGLGKTVLVKGLKYDSKIYWTVHRNLLKAE 162


>AF118395-1|AAD28559.1|  376|Homo sapiens trans-prenyltransferase
           protein.
          Length = 376

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 HKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHSPV 309
           H   P SK     K  D F      LKGLY G++  P+
Sbjct: 39  HHTTPYSKTHSGEKYTDPFKLGWRDLKGLYEGIRKEPL 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,172,091
Number of Sequences: 237096
Number of extensions: 2165964
Number of successful extensions: 3524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3524
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)