Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30b03
(709 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0654 - 19732679-19732837,19733234-19733479,19734470-197346... 40 0.001
12_02_1052 - 25698263-25698394,25698587-25698679,25698945-256989... 34 0.13
08_02_0271 - 15156737-15156868,15157134-15157235,15157342-151574... 33 0.29
06_02_0282 + 13720419-13720985 30 2.1
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 30 2.1
12_02_0780 + 23094989-23095380,23096132-23096573,23096687-230973... 29 2.7
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 29 2.7
09_06_0086 - 20763085-20763162,20763233-20763286,20763287-207639... 29 2.7
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 29 2.7
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 29 3.6
08_02_1585 - 28052927-28053088,28053343-28053579,28053970-280541... 29 4.8
08_01_0576 - 5114636-5115151,5115254-5116183,5116898-5117614,511... 29 4.8
03_06_0106 - 31682200-31682775 29 4.8
05_03_0296 - 11875922-11876378,11876705-11877045 28 6.3
03_02_0997 - 13094357-13094379,13094797-13095058 28 6.3
10_08_0767 + 20441959-20443152 28 8.4
05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062 28 8.4
02_02_0221 + 8006708-8006950,8007049-8007252,8007559-8007750,800... 28 8.4
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 28 8.4
>08_02_0654 -
19732679-19732837,19733234-19733479,19734470-19734667,
19735085-19735201,19735289-19735459,19735632-19735893,
19736205-19736353
Length = 433
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Frame = +2
Query: 5 FMPEEECYHCMASLV-----ASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRL 169
+M EE+ + + +L+ A E ++ L+ + ++ ++ + QH +
Sbjct: 206 YMSEEDAFWLLVALLKGAVHAPMEGLYQAGLPLVQQYLYQ-FEKLVLEQMPQLGQHF--I 262
Query: 170 SGAIGPERIYADWQWWILA---ALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTT 340
I P +YA QW+I + PF +RV D F +EGIKV ++V LA+L H
Sbjct: 263 EEMINPS-MYAS-QWFITVFSYSFPFHLTLRVWDVFLYEGIKVVFQVGLALLRFCHDELV 320
Query: 341 N 343
N
Sbjct: 321 N 321
>12_02_1052 -
25698263-25698394,25698587-25698679,25698945-25698995,
25699074-25699258,25699361-25699407,25699704-25699918
Length = 240
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 148 GATPVAALRRHWPREDLRGLAMVDPGRPSVPSPCTSIGLLLSRGHQG---ILQGSPGDPY 318
G TP + R PR R ++ PG + P + L+ GH G + S +P+
Sbjct: 80 GGTPSISTSRGQPRFPRRRYVLLPPGSLAESPPLLD-RICLAHGHSGGVALTSASLVEPF 138
Query: 319 LVPQAHNEP 345
LV + HN P
Sbjct: 139 LVEEQHNSP 147
>08_02_0271 -
15156737-15156868,15157134-15157235,15157342-15157419,
15157523-15157616,15157736-15157872,15157989-15158105,
15158470-15158940
Length = 376
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 122 IAKKHAKSAAQHLSRLSGAIGPERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYR 298
+AKK + AA HL + + + +W + + LP +RV D F+EG KV +
Sbjct: 236 LAKKCPRIAA-HLEAMGFDVS--LVATEWFLCLFSKTLPSETTLRVWDVLFNEGAKVLFH 292
Query: 299 VALAI 313
VALAI
Sbjct: 293 VALAI 297
>06_02_0282 + 13720419-13720985
Length = 188
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 265 AIQYSYKVRERKGGQDPPLPVRVDPLGAN--GAGEPRQVLRRRLGMFLG 125
A SY+ GG PLP +P N GA E RRR GM++G
Sbjct: 39 ATSVSYRPNPHGGGGHAPLPPPQNPRRPNLVGAEEVAVAARRRGGMWMG 87
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 282 SRYSTG*PWRSLSCSTSTQRTRTLSGTP---KPPRTVWTTPSTNSAGTCPFRPPS 437
S STG P S S S + ++ +P PP + + P TNS+G+ P PPS
Sbjct: 1129 SSSSTGSPPSSTSSSPPSSQSPPPGSSPPPASPPPSTPSAPPTNSSGSAP-SPPS 1182
>12_02_0780 +
23094989-23095380,23096132-23096573,23096687-23097311,
23098240-23098280,23098371-23098439,23098779-23098879,
23099422-23099500,23099946-23100044,23100123-23100191,
23100283-23100332,23100416-23100497,23100997-23101091,
23101263-23101395
Length = 758
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 124 RQETCQVGGATPVAALRRHWPREDLRGLAMVDPGRPSVPSPCTSIGLLLSRGHQGILQGS 303
+QE ++GGA A RR RG A P +P +P+ S G G + +GS
Sbjct: 23 KQEMSKLGGAAAAAERRRSQSVSPRRGAAPPPPHQPPLPARRLSGG--FEGGARAWARGS 80
Query: 304 PGDPYLVP 327
P+ P
Sbjct: 81 ASFPHSSP 88
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 174 APLAPRGSTRTGNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWR-SLSCSTSTQRTRT 350
A LA G+TR+ N G SL L W+ F+ A R+ PWR +L+ S R+
Sbjct: 750 ALLAATGATRSANIGIVIAIGSLGLLIGWLLEFSTARRFVCW-PWRINLNVPQSWPNLRS 808
Query: 351 L 353
L
Sbjct: 809 L 809
>09_06_0086 -
20763085-20763162,20763233-20763286,20763287-20763975,
20764173-20764324,20764404-20764604,20764920-20765064,
20765552-20765588,20765880-20765965,20766093-20766329,
20766501-20766609,20767025-20767135
Length = 632
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 364 RSHQERCGPRHRQILQEHARFAHQAAKDSVYHTRLEFAIHIAGVHKNGDDTEVEAS 531
+ H E C PR + R + A+ V++ R+ +IHI G G + EA+
Sbjct: 561 KGHHEPCIPRSVKKGSNIGRLFYVCARAQVFNFRINCSIHIRGTIIKGPASNQEAN 616
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 303 PWRSLSCSTSTQRTRTLSGTPKPPRTVWTTPSTNSAGTCPFRPPS 437
P+ + + ++ + RT + P PP PS++SA P R P+
Sbjct: 104 PYLAAASASLESKPRTRAPPPPPPAPAPAPPSSSSAAAAPGRSPA 148
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 470 SSQYISRVFIKTEMTLKSKQVITGSRLVRSRSSD-NLPTSQSQVNIQMMSHTLTIRELFT 646
++Q + V +M +Q GS +++ S D N TS+ QV ++ T I + +
Sbjct: 538 AAQNMHEVVSSNQMKYSPRQE-NGSAAIKAPSEDMNELTSELQVEEPIVVGTEEIARVAS 596
Query: 647 LWSWLPVR 670
LWS +PV+
Sbjct: 597 LWSGIPVQ 604
>08_02_1585 -
28052927-28053088,28053343-28053579,28053970-28054176,
28054797-28054876,28055059-28055137
Length = 254
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 RRSHQERCGPRHRQI-LQEHARFAHQAAKDSVYHTRLEFAIHIAGV 495
R SHQ +C PRH I + H + D V T +E + I+GV
Sbjct: 101 RVSHQLQCTPRHATITIILHTPIRRSSYHDVVRVTEVEDVLDISGV 146
>08_01_0576 -
5114636-5115151,5115254-5116183,5116898-5117614,
5119630-5119746,5119930-5120295,5121365-5121634
Length = 971
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 193 DLRGLAMVDPGRPSVPSPCTSIGLLLSRGHQGILQGSPGDPYLVPQAHNEP 345
D R + D +PS P L LS+ +QG + G+ G P+ PQ H P
Sbjct: 647 DRRTMNADDLAQPSYQHPDL---LSLSQQNQGTVLGNQGQPHHPPQFHPHP 694
>03_06_0106 - 31682200-31682775
Length = 191
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 8/42 (19%)
Frame = +3
Query: 327 TSTQRTRTLSGTPKPPRTVWT-----TPSTNSAG---TCPFR 428
TST R R S + PPR+ WT P ++AG T PFR
Sbjct: 109 TSTSRGRATSHSSAPPRSCWTLTASHPPPRSAAGFALTTPFR 150
>05_03_0296 - 11875922-11876378,11876705-11877045
Length = 265
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 537 PARGWSGLGPRTTCQRASRRS 599
P RGWSG GPR RRS
Sbjct: 84 PVRGWSGDGPRQRGDELPRRS 104
>03_02_0997 - 13094357-13094379,13094797-13095058
Length = 94
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 377 SWWLRRTTQSSGSLC--ACGTR*GSPGLPCRIP*CPRERS 264
+WWLRR SG+ AC GS G P +P PR R+
Sbjct: 42 AWWLRRRRSCSGADVEPACAALAGS-GRPRPVPSPPRRRA 80
>10_08_0767 + 20441959-20443152
Length = 397
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 154 TPVAALRRHWPREDLRGLAMVDPGRPSVP 240
T AALR H PR +RG + D G VP
Sbjct: 17 TCAAALRGHDPRRAMRGRLLADGGGAVVP 45
>05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062
Length = 456
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 434 WWAKRACSCRICRWRGPHRSWWLRR 360
WW +R C WR R+W LR+
Sbjct: 92 WWRRRGCRGGGFGWRRRQRTWRLRQ 116
>02_02_0221 +
8006708-8006950,8007049-8007252,8007559-8007750,
8007860-8008098,8009756-8009851,8009966-8010058,
8011481-8011561,8012432-8012518,8012904-8013033,
8013223-8013528,8013749-8013772,8014162-8014240,
8014572-8014708,8015427-8015477
Length = 653
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 382 CGPRHRQILQEHARFAHQAAKDSVYHTRLEFAIHIAGVHKNGDDTEVEASD 534
CG R++++EH R A + + + TR + G ++GD V SD
Sbjct: 338 CGRSRRKVVEEHQRTASSSPEHPLSRTR---GRSMLGDRQHGDGVAVSRSD 385
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
+ EE+C H A+ A LL+++T + ++ I KK++ S + LSR S P
Sbjct: 559 LQEEDCQHYEAAAAAFDFTEMSADQLLLSDLTNEVLLDIYKKYSVSKSL-LSRFSSFDRP 617
Query: 188 ERI 196
+ +
Sbjct: 618 KPV 620
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,223,244
Number of Sequences: 37544
Number of extensions: 579923
Number of successful extensions: 2092
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2091
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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