Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30b03
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB032997-1|BAA86485.1| 595|Homo sapiens KIAA1171 protein protein. 114 3e-25
BC127015-1|AAI27016.1| 559|Homo sapiens TBC1D24 protein protein. 113 8e-25
BC127014-1|AAI27015.1| 553|Homo sapiens TBC1 domain family, mem... 109 1e-23
BC112389-1|AAI12390.1| 553|Homo sapiens TBC1 domain family, mem... 109 1e-23
CT841514-1|CAJ86444.1| 508|Homo sapiens dJ130H16.2 protein. 46 1e-04
BC150214-1|AAI50215.1| 508|Homo sapiens TBC1 domain family, mem... 46 1e-04
BC150187-1|AAI50188.1| 508|Homo sapiens TBC1 domain family, mem... 46 1e-04
BC142940-1|AAI42941.1| 508|Homo sapiens TBC1 domain family, mem... 46 1e-04
AK074656-1|BAC11117.1| 508|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AF331038-1|AAK35048.1| 508|Homo sapiens EPI64 protein. 46 1e-04
AC004997-3|AAC23434.1| 438|Homo sapiens WUGSC:H_DJ130H16.2 prot... 46 1e-04
BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein. 45 2e-04
BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, mem... 45 2e-04
BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, mem... 45 2e-04
BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, mem... 45 2e-04
BC063112-1|AAH63112.1| 622|Homo sapiens TBC1D10B protein protein. 45 2e-04
BC050523-1|AAH50523.2| 385|Homo sapiens TBC1D10B protein protein. 45 2e-04
AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens ... 45 2e-04
AC016738-3|AAY14824.1| 897|Homo sapiens unknown protein. 45 2e-04
AB024057-1|BAA75489.1| 897|Homo sapiens vascular Rab-GAP/TBC-co... 45 2e-04
AB017114-1|BAA76517.1| 733|Homo sapiens AD 3 protein. 45 2e-04
BC014111-1|AAH14111.1| 794|Homo sapiens ecotropic viral integra... 45 3e-04
BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, mem... 44 4e-04
AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein. 44 4e-04
BC129994-1|AAI29995.1| 1232|Homo sapiens TBC1 domain family, mem... 44 7e-04
BC080659-1|AAH80659.1| 599|Homo sapiens TBC1D9B protein protein. 44 7e-04
AB014576-1|BAA31651.1| 1262|Homo sapiens KIAA0676 protein protein. 44 7e-04
BC062999-1|AAH62999.1| 446|Homo sapiens TBC1 domain family, mem... 43 0.001
BC036873-1|AAH36873.3| 446|Homo sapiens TBC1 domain family, mem... 43 0.001
AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral integra... 41 0.005
AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral integra... 41 0.005
AF042345-1|AAC16041.1| 607|Homo sapiens truncated EVI5 protein. 41 0.005
AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein. 41 0.005
AK002101-1|BAA92086.1| 289|Homo sapiens protein ( Homo sapiens ... 38 0.027
AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein. 38 0.047
AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein. 38 0.047
AK091248-1|BAC03620.1| 340|Homo sapiens protein ( Homo sapiens ... 38 0.047
BC112125-1|AAI12126.1| 257|Homo sapiens GRTP1 protein protein. 36 0.19
BC112123-1|AAI12124.1| 257|Homo sapiens GRTP1 protein protein. 36 0.19
BC080640-1|AAH80640.1| 354|Homo sapiens Unknown (protein for IM... 36 0.19
BC062461-1|AAH62461.1| 317|Homo sapiens GRTP1 protein protein. 36 0.19
BC033071-1|AAH33071.2| 276|Homo sapiens GRTP1 protein protein. 36 0.19
AL136221-9|CAI13799.2| 336|Homo sapiens growth hormone regulate... 36 0.19
AL136221-8|CAI13800.2| 266|Homo sapiens growth hormone regulate... 36 0.19
AK026127-1|BAB15368.1| 257|Homo sapiens protein ( Homo sapiens ... 36 0.19
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 35 0.33
BC041392-1|AAH41392.1| 487|Homo sapiens FAM123A protein protein. 33 1.0
D13644-1|BAA02807.2| 838|Homo sapiens KIAA0019 protein protein. 33 1.3
BC042943-1|AAH42943.1| 828|Homo sapiens USP6 N-terminal like pr... 33 1.3
AL590416-1|CAI16966.1| 828|Homo sapiens USP6 N-terminal like pr... 33 1.3
AL512631-1|CAH70484.1| 828|Homo sapiens USP6 N-terminal like pr... 33 1.3
AK074473-1|BAB85091.1| 178|Homo sapiens protein ( Homo sapiens ... 33 1.3
BC071978-1|AAH71978.1| 502|Homo sapiens TBC1D2 protein protein. 32 1.7
BC028918-1|AAH28918.1| 468|Homo sapiens TBC1D2 protein protein. 32 1.7
AL591502-1|CAI12579.1| 860|Homo sapiens TBC1 domain family, mem... 32 1.7
AL360081-3|CAH71886.1| 860|Homo sapiens TBC1 domain family, mem... 32 1.7
AL360081-1|CAH71884.1| 710|Homo sapiens TBC1 domain family, mem... 32 1.7
AL137073-10|CAI13894.1| 468|Homo sapiens TBC1 domain family, me... 32 1.7
AL137073-2|CAI13884.1| 860|Homo sapiens TBC1 domain family, mem... 32 1.7
AL137073-1|CAI13883.1| 710|Homo sapiens TBC1 domain family, mem... 32 1.7
AK026105-1|BAB15361.1| 710|Homo sapiens protein ( Homo sapiens ... 32 1.7
S75462-1|AAB20836.1| 345|Homo sapiens collagen type VI alpha 2(... 32 2.3
BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alph... 32 2.3
AY029208-1|AAA52056.2| 1019|Homo sapiens type VI collagen alpha ... 32 2.3
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 31 4.0
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.0
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 31 4.0
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 31 4.0
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.3
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 5.3
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 5.3
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.3
AK122585-1|BAC56926.1| 201|Homo sapiens FLJ00332 protein protein. 31 5.3
U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein. 30 9.3
>AB032997-1|BAA86485.1| 595|Homo sapiens KIAA1171 protein protein.
Length = 595
Score = 114 bits (275), Expect = 3e-25
Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Frame = +2
Query: 14 EEECYHCMASLVASKE--KMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
E EC+ ++A + + I Q+ L E + T + K+ ++A + + +S +
Sbjct: 184 EAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDV-- 241
Query: 188 ERIYADWQWWILAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
++YADWQ W+ LP + RV D F EG KV YRVALAIL FHK Q E ++
Sbjct: 242 LQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLE--SD 299
Query: 368 ATKNGVDHAIDKFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSR 547
+ K + + + VSP KLL AF IR LS + I + + E LK K + +
Sbjct: 300 SVKQDIRTFVRDIAKT--VSPEKLLEKAFAIRLLSRKEIQLLQMANEKALKQKGITVKQK 357
Query: 548 LVRSRSSDNLPTSQSQVNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTT 706
V + + N + S +++RE+ +WSW+P R + QP+LL+++
Sbjct: 358 SVSLSKRQFVHLAVHAENFR--SEIVSVREMRDIWSWVPERFALCQPLLLFSS 408
>BC127015-1|AAI27016.1| 559|Homo sapiens TBC1D24 protein protein.
Length = 559
Score = 113 bits (271), Expect = 8e-25
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Frame = +2
Query: 14 EEECYHCMASLVASKE--KMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
E EC+ ++A + + I Q+ L E + T + K+ ++A + + +S +
Sbjct: 148 EAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDV-- 205
Query: 188 ERIYADWQWWILAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
++YADWQ W+ LP + RV D F EG KV YRVALAIL FHK Q E ++
Sbjct: 206 LQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLE--SD 263
Query: 368 ATKNGVDHAIDKFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSR 547
+ K + + + VSP KLL AF IR S + I + + E LK K + +
Sbjct: 264 SVKQDIRTFVRDIAKT--VSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQKGITVKQK 321
Query: 548 LVRSRSSDNLPTSQSQVNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTT 706
V + + N + S +++RE+ +WSW+P R + QP+LL+++
Sbjct: 322 SVSLSKRQFVHLAVHAENFR--SEIVSVREMRDIWSWVPERFALCQPLLLFSS 372
>BC127014-1|AAI27015.1| 553|Homo sapiens TBC1 domain family, member
24 protein.
Length = 553
Score = 109 bits (261), Expect = 1e-23
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Frame = +2
Query: 14 EEECYHCMASLVASKE--KMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
E EC+ ++A + + I Q+ L E + T + K+ ++A + + +S +
Sbjct: 148 EAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDV-- 205
Query: 188 ERIYADWQWWILAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
++YADWQ W+ LP + RV D F EG KV YRVALAIL FHK Q E ++
Sbjct: 206 LQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLE--SD 263
Query: 368 ATKNGVDHAIDKFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSR 547
+ K + + + VSP KLL AF IR S + I + + E LK K G
Sbjct: 264 SVKQDIRTFVRDIAKT--VSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQK----GIT 317
Query: 548 LVRSRSSDNLPTSQSQVNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTT 706
+ + R +L +++S +RE+ +WSW+P R + QP+LL+++
Sbjct: 318 VKQKRQFVHLAVHAENFRSEIVS----VREMRDIWSWVPERFALCQPLLLFSS 366
>BC112389-1|AAI12390.1| 553|Homo sapiens TBC1 domain family, member
24 protein.
Length = 553
Score = 109 bits (261), Expect = 1e-23
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Frame = +2
Query: 14 EEECYHCMASLVASKE--KMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
E EC+ ++A + + I Q+ L E + T + K+ ++A + + +S +
Sbjct: 148 EAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDV-- 205
Query: 188 ERIYADWQWWILAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
++YADWQ W+ LP + RV D F EG KV YRVALAIL FHK Q E ++
Sbjct: 206 LQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLE--SD 263
Query: 368 ATKNGVDHAIDKFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSR 547
+ K + + + VSP KLL AF IR S + I + + E LK K G
Sbjct: 264 SVKQDIRTFVRDIAKT--VSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQK----GIT 317
Query: 548 LVRSRSSDNLPTSQSQVNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTT 706
+ + R +L +++S +RE+ +WSW+P R + QP+LL+++
Sbjct: 318 VKQKRQFVHLAVHAENFRSEIVS----VREMRDIWSWVPERFALCQPLLLFSS 366
>CT841514-1|CAJ86444.1| 508|Homo sapiens dJ130H16.2 protein.
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>BC150214-1|AAI50215.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>BC150187-1|AAI50188.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>BC142940-1|AAI42941.1| 508|Homo sapiens TBC1 domain family, member
10A protein.
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>AK074656-1|BAC11117.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ90175 fis, clone MAMMA1000496, weakly similar to
MIC1 PROTEIN. ).
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>AF331038-1|AAK35048.1| 508|Homo sapiens EPI64 protein.
Length = 508
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 210 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 267
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 311
>AC004997-3|AAC23434.1| 438|Homo sapiens WUGSC:H_DJ130H16.2
protein.
Length = 438
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + ++ ++ + + + +K + A +HLSR I P
Sbjct: 140 MPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQK--IDP 197
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W + LP+ ++RV D FF EG+K+ +RV L +L
Sbjct: 198 LLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLL 241
>BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein.
Length = 668
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 319 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 376
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 377 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 420
>BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 184 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 241
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 242 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 285
>BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 184 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 241
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 242 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 285
>BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 184 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 241
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 242 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 285
>BC063112-1|AAH63112.1| 622|Homo sapiens TBC1D10B protein protein.
Length = 622
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 273 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 330
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 331 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 374
>BC050523-1|AAH50523.2| 385|Homo sapiens TBC1D10B protein protein.
Length = 385
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 36 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 93
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 94 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 137
>AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ13130 fis, clone NT2RP3002972, weakly similar to
Halocynthia roretzi mRNA for HrPET-1. ).
Length = 533
Score = 45.2 bits (102), Expect = 2e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
MP E+ + C+ + + + ++ + + ++ + A +HL R I P
Sbjct: 184 MPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQR--IDP 241
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 242 VLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 285
>AC016738-3|AAY14824.1| 897|Homo sapiens unknown protein.
Length = 897
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 FMPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIG 184
+ EEE + + ++ + + +V ++ K H A+H++ LS
Sbjct: 360 YTKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSALAS 419
Query: 185 PERIYADWQWWI-LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+ W + L+ +P V V+DCFF++GIK +++ LA+L
Sbjct: 420 ---VSLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVL 461
>AB024057-1|BAA75489.1| 897|Homo sapiens vascular
Rab-GAP/TBC-containing protein protein.
Length = 897
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 FMPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIG 184
+ EEE + + ++ + + +V ++ K H A+H++ LS
Sbjct: 360 YTKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSALAS 419
Query: 185 PERIYADWQWWI-LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+ W + L+ +P V V+DCFF++GIK +++ LA+L
Sbjct: 420 ---VSLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVL 461
>AB017114-1|BAA76517.1| 733|Homo sapiens AD 3 protein.
Length = 733
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 FMPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIG 184
+ EEE + + ++ + + +V ++ K H A+H++ LS
Sbjct: 356 YTKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSALAS 415
Query: 185 PERIYADWQWWI-LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+ W + L+ +P V V+DCFF++GIK +++ LA+L
Sbjct: 416 ---VSLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVL 457
>BC014111-1|AAH14111.1| 794|Homo sapiens ecotropic viral
integration site 5-like protein.
Length = 794
Score = 44.8 bits (101), Expect = 3e-04
Identities = 25/114 (21%), Positives = 53/114 (46%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAEATKNGVDHAID 400
L P P RV D F +EG+++ +RV LA+L + + E ++ + + H D
Sbjct: 281 LTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQAELMQLDMEGMSQYFQRVIPHQFD 340
Query: 401 KFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSRLVRSR 562
+ + ++ ++ L +Y + + E ++ K++ T +RL++ R
Sbjct: 341 SCPDKLVLKAYQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQR 394
>BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, member
9 (with GRAM domain) protein.
Length = 1266
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V V+DCFF+EGIKV +++ALA+L
Sbjct: 683 LSVMPFESAVVVVDCFFYEGIKVIFQLALAVL 714
>AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens
cDNA FLJ45076 fis, clone BRAWH3027574, weakly similar
to Homo sapiens vascular Rab-GAP/TBC-containing (VRP).
).
Length = 1015
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V V+DCFF+EGIKV +++ALA+L
Sbjct: 530 LSVMPFESAVVVVDCFFYEGIKVIFQLALAVL 561
>AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein.
Length = 1291
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V V+DCFF+EGIKV +++ALA+L
Sbjct: 708 LSVMPFESAVVVVDCFFYEGIKVIFQLALAVL 739
>BC129994-1|AAI29995.1| 1232|Homo sapiens TBC1 domain family, member
9B (with GRAM domain) protein.
Length = 1232
Score = 43.6 bits (98), Expect = 7e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V ++DCFF+EGIKV +VALA+L
Sbjct: 676 LSVMPFESAVVIVDCFFYEGIKVILQVALAVL 707
>BC080659-1|AAH80659.1| 599|Homo sapiens TBC1D9B protein protein.
Length = 599
Score = 43.6 bits (98), Expect = 7e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V ++DCFF+EGIKV +VALA+L
Sbjct: 42 LSVMPFESAVVIVDCFFYEGIKVILQVALAVL 73
>AB014576-1|BAA31651.1| 1262|Homo sapiens KIAA0676 protein protein.
Length = 1262
Score = 43.6 bits (98), Expect = 7e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
L+ +PF V ++DCFF+EGIKV +VALA+L
Sbjct: 688 LSVMPFESAVVIVDCFFYEGIKVILQVALAVL 719
>BC062999-1|AAH62999.1| 446|Homo sapiens TBC1 domain family, member
10C protein.
Length = 446
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
+P EE + C+ + + + + M + ++ +HL ++ +GP
Sbjct: 191 LPPEEAFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMALLRRLLPHVHKHLQQVG--VGP 248
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAILIL 322
+W + A +LPFP ++RV D F EG +V +RV L ++ L
Sbjct: 249 LLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGARVLFRVGLTLVRL 294
>BC036873-1|AAH36873.3| 446|Homo sapiens TBC1 domain family, member
10C protein.
Length = 446
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 MPEEECYHCMASLVASKEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGP 187
+P EE + C+ + + + + M + ++ +HL ++ +GP
Sbjct: 191 LPPEEAFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMALLRRLLPHVHKHLQQVG--VGP 248
Query: 188 ERIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAILIL 322
+W + A +LPFP ++RV D F EG +V +RV L ++ L
Sbjct: 249 LLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGARVLFRVGLTLVRL 294
>AL354890-2|CAI21914.1| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAEATKNGVDHAID 400
L P P R+ D F EG+++ +RV LA+L + + E + + + H D
Sbjct: 329 LTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEGMLQHFQKVIPHQFD 388
Query: 401 KFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSRLVRSR 562
+ + ++ + ++ L +Y + + E ++ K++ T +RL++ R
Sbjct: 389 GVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQR 442
>AL133332-1|CAC19437.2| 810|Homo sapiens ecotropic viral
integration site 5 protein.
Length = 810
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAEATKNGVDHAID 400
L P P R+ D F EG+++ +RV LA+L + + E + + + H D
Sbjct: 329 LTTFPLPIATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEGMLQHFQKVIPHQFD 388
Query: 401 KFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSRLVRSR 562
+ + ++ + ++ L +Y + + E ++ K++ T +RL++ R
Sbjct: 389 GVPDKLIQAAYQVKYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQR 442
>AF042345-1|AAC16041.1| 607|Homo sapiens truncated EVI5 protein.
Length = 607
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAEATKNGVDHAID 400
L P P R+ D F EG+++ +RV LA+L + + E + + + H D
Sbjct: 329 LTTFPLPVATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEGMLQHFQKVIPHQFD 388
Query: 401 KFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSRLVRSR 562
+ + ++ + ++ L +Y + + E ++ K++ T +RL++ R
Sbjct: 389 GVPDKLIQAAYQVQYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQR 442
>AF008915-1|AAC16031.1| 810|Homo sapiens EVI-5 homolog protein.
Length = 810
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAILILFHKHTTNQNSEWYAEATKNGVDHAID 400
L P P R+ D F EG+++ +RV LA+L + + E + + + H D
Sbjct: 329 LTTFPLPVATRIFDIFMSEGLEIVFRVGLALLQMNQAELMQLDMEGMLQHFQKVIPHQFD 388
Query: 401 KFCRNMPVSPTKLLRTAFTIRALSSQYISRVFIKTEMTLKSKQVITGSRLVRSR 562
+ + ++ + ++ L +Y + + E ++ K++ T +RL++ R
Sbjct: 389 GVPDKLIQAAYQVQYNSKKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQR 442
>AK002101-1|BAA92086.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ11239 fis, clone PLACE1008533. ).
Length = 289
Score = 38.3 bits (85), Expect = 0.027
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 203 DWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
+W I A LP+ ++RV D FF EG+K+ +RVAL +L
Sbjct: 3 EWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLL 41
>AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.047
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
++ LP V V+DCFF++GIK ++ LAIL
Sbjct: 713 ISVLPIESAVNVVDCFFYDGIKAILQLGLAIL 744
>AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.047
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
++ LP V V+DCFF++GIK ++ LAIL
Sbjct: 713 ISVLPIESAVNVVDCFFYDGIKAILQLGLAIL 744
>AK091248-1|BAC03620.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ33929 fis, clone CTONG2017458, moderately
similar to Homo sapiens mRNA for vascular
Rab-GAP/TBC-containing ).
Length = 340
Score = 37.5 bits (83), Expect = 0.047
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 221 LAALPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
++ LP V V+DCFF++GIK ++ LAIL
Sbjct: 149 ISVLPIESAVNVVDCFFYDGIKAILQLGLAIL 180
>BC112125-1|AAI12126.1| 257|Homo sapiens GRTP1 protein protein.
Length = 257
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 155 LPVETVLRIWDCLFNEGSKIIFRVALTLI 183
>BC112123-1|AAI12124.1| 257|Homo sapiens GRTP1 protein protein.
Length = 257
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 155 LPVETVLRIWDCLFNEGSKIIFRVALTLI 183
>BC080640-1|AAH80640.1| 354|Homo sapiens Unknown (protein for
IMAGE:6644085) protein.
Length = 354
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 260 LPVETVLRIWDCLFNEGSKIIFRVALTLI 288
>BC062461-1|AAH62461.1| 317|Homo sapiens GRTP1 protein protein.
Length = 317
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 223 LPVETVLRIWDCLFNEGSKIIFRVALTLI 251
>BC033071-1|AAH33071.2| 276|Homo sapiens GRTP1 protein protein.
Length = 276
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 182 LPVETVLRIWDCLFNEGSKIIFRVALTLI 210
>AL136221-9|CAI13799.2| 336|Homo sapiens growth hormone regulated
TBC protein 1 protein.
Length = 336
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 242 LPVETVLRIWDCLFNEGSKIIFRVALTLI 270
>AL136221-8|CAI13800.2| 266|Homo sapiens growth hormone regulated
TBC protein 1 protein.
Length = 266
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 164 LPVETVLRIWDCLFNEGSKIIFRVALTLI 192
>AK026127-1|BAB15368.1| 257|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22474 fis, clone HRC10568. ).
Length = 257
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 230 LPFPHLVRVLDCFFHEGIKVFYRVALAIL 316
LP ++R+ DC F+EG K+ +RVAL ++
Sbjct: 155 LPVETVLRIWDCLFNEGSKIIFRVALTLI 183
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 34.7 bits (76), Expect = 0.33
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +3
Query: 168 SPAPLAPRGSTRTGNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWRSLSCSTSTQRTR 347
+P+PL +T + SW R+ TL I S T+ S S + + ST
Sbjct: 609 APSPLVGEPPAQTQSTSSWQKSRTTTLVTSSITSTTQTSTTSAPTTSTTPASIPSTTSAP 668
Query: 348 TLSGTPKPPRTVWTTPSTNSAGT 416
T S T P + + P+T++ T
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTST 691
>BC041392-1|AAH41392.1| 487|Homo sapiens FAM123A protein protein.
Length = 487
Score = 33.1 bits (72), Expect = 1.0
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 354 SGTPKPPRTVWTTPSTNSAGTCPFRPPS 437
+G P RT WTTP S+GTC RP S
Sbjct: 421 AGKRWPARTRWTTPIYRSSGTCSPRPRS 448
>D13644-1|BAA02807.2| 838|Homo sapiens KIAA0019 protein protein.
Length = 838
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 113 VMQIAKKHAKSAAQHLSRLSGAIGPERIYADW---QWWILAAL---PFPHLVRVLDCFFH 274
+++ + H K + LS+L + + IY + +W+ L PF +R+ D +
Sbjct: 241 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 300
Query: 275 EGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
EG +V ++ IL L KH + E E
Sbjct: 301 EGERVLTAMSYTILKLHKKHLMKLSMEELVE 331
>BC042943-1|AAH42943.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 113 VMQIAKKHAKSAAQHLSRLSGAIGPERIYADW---QWWILAAL---PFPHLVRVLDCFFH 274
+++ + H K + LS+L + + IY + +W+ L PF +R+ D +
Sbjct: 231 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 290
Query: 275 EGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
EG +V ++ IL L KH + E E
Sbjct: 291 EGERVLTAMSYTILKLHKKHLMKLSMEELVE 321
>AL590416-1|CAI16966.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 113 VMQIAKKHAKSAAQHLSRLSGAIGPERIYADW---QWWILAAL---PFPHLVRVLDCFFH 274
+++ + H K + LS+L + + IY + +W+ L PF +R+ D +
Sbjct: 231 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 290
Query: 275 EGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
EG +V ++ IL L KH + E E
Sbjct: 291 EGERVLTAMSYTILKLHKKHLMKLSMEELVE 321
>AL512631-1|CAH70484.1| 828|Homo sapiens USP6 N-terminal like
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 113 VMQIAKKHAKSAAQHLSRLSGAIGPERIYADW---QWWILAAL---PFPHLVRVLDCFFH 274
+++ + H K + LS+L + + IY + +W+ L PF +R+ D +
Sbjct: 231 LLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIF 290
Query: 275 EGIKVFYRVALAILILFHKHTTNQNSEWYAE 367
EG +V ++ IL L KH + E E
Sbjct: 291 EGERVLTAMSYTILKLHKKHLMKLSMEELVE 321
>AK074473-1|BAB85091.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ23893 fis, clone LNG14589. ).
Length = 178
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 285 RYSTG*PWRSLSCSTSTQRTRTLSGTPKPPRTVWTTPSTNSAGTCPFRPP 434
R+ T P S + S T RT +G + R+ P T SA CP+R P
Sbjct: 13 RWPTARPTSSTAISARTSAGRTPAGPRRSWRSTSPLPGTASAPCCPWRAP 62
>BC071978-1|AAH71978.1| 502|Homo sapiens TBC1D2 protein protein.
Length = 502
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 303 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 360
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 361 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 402
>BC028918-1|AAH28918.1| 468|Homo sapiens TBC1D2 protein protein.
Length = 468
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 269 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 326
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 327 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 368
>AL591502-1|CAI12579.1| 860|Homo sapiens TBC1 domain family, member 2
protein.
Length = 860
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 729 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 786
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 787 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 828
>AL360081-3|CAH71886.1| 860|Homo sapiens TBC1 domain family, member 2
protein.
Length = 860
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 729 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 786
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 787 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 828
>AL360081-1|CAH71884.1| 710|Homo sapiens TBC1 domain family, member
2 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 511 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 568
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 569 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 610
>AL137073-10|CAI13894.1| 468|Homo sapiens TBC1 domain family,
member 2 protein.
Length = 468
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 269 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 326
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 327 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 368
>AL137073-2|CAI13884.1| 860|Homo sapiens TBC1 domain family, member 2
protein.
Length = 860
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 729 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 786
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 787 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 828
>AL137073-1|CAI13883.1| 710|Homo sapiens TBC1 domain family, member
2 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 511 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 568
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 569 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 610
>AK026105-1|BAB15361.1| 710|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22452 fis, clone HRC09667. ).
Length = 710
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 EEECYHCMASLVAS-KEKMFITQTKLLNEVTWKTVMQIAKKHAKSAAQHLSRLSGAIGPE 190
EE + C+ ++V + + T ++V + + + + HL + +
Sbjct: 511 EESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHH--VDLS 568
Query: 191 RIYADWQWWILA-ALPFPHLVRVLDCFFHEGIKVFYRVALAI 313
+ +W + A +L L+RV D F +EG KV +R ALAI
Sbjct: 569 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAI 610
>S75462-1|AAB20836.1| 345|Homo sapiens collagen type VI alpha 2(VI)
chain protein.
Length = 345
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 217 DPGRPSVPSPCTSIGLLLSRGHQGILQGSPGDP 315
DPGRP P IG S+G+QG G+PG P
Sbjct: 129 DPGRPGRRGPPGEIGAKGSKGYQG-NNGAPGSP 160
>BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alpha 2
protein.
Length = 1019
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 217 DPGRPSVPSPCTSIGLLLSRGHQGILQGSPGDP 315
DPGRP P IG S+G+QG G+PG P
Sbjct: 374 DPGRPGRRGPPGEIGAKGSKGYQG-NNGAPGSP 405
>AY029208-1|AAA52056.2| 1019|Homo sapiens type VI collagen alpha 2
chain precursor protein.
Length = 1019
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 217 DPGRPSVPSPCTSIGLLLSRGHQGILQGSPGDP 315
DPGRP P IG S+G+QG G+PG P
Sbjct: 374 DPGRPGRRGPPGEIGAKGSKGYQG-NNGAPGSP 405
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain containing
protein ).).
Length = 2193
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 228 PFRSLTLYEYWIASFTRASRYSTG*PWRSLSCSTSTQRTRTLSGTPKPPRTVWTTP 395
P R +T+ A TR S+ PW S + R L G+P PPRT TP
Sbjct: 1179 PSRQVTMLPAKQAELTRRSQAEPPHPW---SPEKRPEGDRQLQGSPLPPRTSARTP 1231
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 4.0
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +3
Query: 195 STRTGNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWRSLS---CSTSTQRTRTLSGTP 365
S+ G + P RS T SFT S G W LS T+T T T S TP
Sbjct: 3114 SSSPGTATALPALRS-TATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 3172
Query: 366 KP--PRTVWTTPSTNSAGTCPFRPPS 437
+ TV TT +T + T PS
Sbjct: 3173 ETVHTSTVLTTTATTTGATGSVATPS 3198
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +3
Query: 207 GNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWRSLSCST---STQRTRTLSGTPKP-- 371
G + P RS T SFT S G W LS +T +T T T S TP+
Sbjct: 635 GTATALPALRS-TATTPTATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVH 693
Query: 372 PRTVWTTPSTNSAGTCPFRPPS 437
TV TT +T + T PS
Sbjct: 694 TSTVLTTTATTTGATGSVATPS 715
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +3
Query: 207 GNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWRSLSCST---STQRTRTLSGTPKP-- 371
G + P RS T SFT S G W LS +T +T T T S TP+
Sbjct: 2391 GTATALPALRS-TATTPTATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVH 2449
Query: 372 PRTVWTTPSTNSAGTCPFRPPS 437
TV TT +T + T PS
Sbjct: 2450 TSTVLTTTATTTGATGSVATPS 2471
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 228 PFRSLTLYEYWIASFTRASRYSTG*PWRSLSCSTSTQRTRTLSGTPKPPRTVWTTP 395
P R +T+ A TR S+ PW S + R L G+P PPRT TP
Sbjct: 1351 PSRQVTMLPAKQAELTRRSQAEPPHPW---SPEKRPEGDRQLQGSPLPPRTSARTP 1403
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 228 PFRSLTLYEYWIASFTRASRYSTG*PWRSLSCSTSTQRTRTLSGTPKPPRTVWTTP 395
P R +T+ A TR S+ PW S + R L G+P PPRT TP
Sbjct: 1179 PSRQVTMLPAKQAELTRRSQAEPPHPW---SPEKRPEGDRQLQGSPLPPRTSARTP 1231
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 AMVDPGRPSVPSPCTSIGLLLSRGHQGI--LQGSPGDP 315
AM PG P P P GL GHQ + LQG PG P
Sbjct: 828 AMGPPGPPGAPGPAGPAGL---PGHQEVLNLQGPPGPP 862
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 AMVDPGRPSVPSPCTSIGLLLSRGHQGI--LQGSPGDP 315
AM PG P P P GL GHQ + LQG PG P
Sbjct: 863 AMGPPGPPGAPGPAGPAGL---PGHQEVLNLQGPPGPP 897
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 AMVDPGRPSVPSPCTSIGLLLSRGHQGI--LQGSPGDP 315
AM PG P P P GL GHQ + LQG PG P
Sbjct: 828 AMGPPGPPGAPGPAGPAGL---PGHQEVLNLQGPPGPP 862
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.3
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 AMVDPGRPSVPSPCTSIGLLLSRGHQGI--LQGSPGDP 315
AM PG P P P GL GHQ + LQG PG P
Sbjct: 828 AMGPPGPPGAPGPAGPAGL---PGHQEVLNLQGPPGPP 862
>AK122585-1|BAC56926.1| 201|Homo sapiens FLJ00332 protein protein.
Length = 201
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 116 MQIAKKHAKSAAQHLSRLSGAIGPERIYADWQWWILA-ALPFPHLVRVLDCFFHEG 280
M + ++ +HL ++ +GP +W + A +LPFP ++RV D F EG
Sbjct: 16 MALLRRLLPHVHKHLQQVG--VGPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEG 69
>U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein.
Length = 328
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +3
Query: 207 GNGGSWPPFRSLTLYEYWIASFTRASRYSTG*PWRSLS---CSTSTQRTRTLSGTPKPPR 377
G + P RS T SFT S G W LS T+T T T S TP+
Sbjct: 81 GTATALPALRS-TATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAH 139
Query: 378 --TVWTTPSTNSAGTCPFRPPS 437
TV TT +T + T PS
Sbjct: 140 TSTVLTTTATTTRATGSVATPS 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,569,147
Number of Sequences: 237096
Number of extensions: 3172163
Number of successful extensions: 9454
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 8413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9429
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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