Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30a17
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...    36   0.063
AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...    36   0.063
AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...    33   0.33 

>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score = 35.9 bits (79), Expect = 0.063
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 293 ATPAVPQVPLLDDDTIAFGEED 358
           A+  V  VPLLDDDTI FGEED
Sbjct: 2   ASATVRNVPLLDDDTIPFGEED 23


>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score = 35.9 bits (79), Expect = 0.063
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 293 ATPAVPQVPLLDDDTIAFGEED 358
           A+  V  VPLLDDDTI FGEED
Sbjct: 2   ASATVRNVPLLDDDTIPFGEED 23


>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 314 VPLLDDDTIAFGEED 358
           VPLLDDDTI FGEED
Sbjct: 6   VPLLDDDTIPFGEED 20


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,682,356
Number of Sequences: 53049
Number of extensions: 580230
Number of successful extensions: 1318
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)