Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2p13
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p pro...    84   2e-16
AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA...    84   2e-16
AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC...    31   1.2  

>AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p
           protein.
          Length = 85

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
 Frame = +1

Query: 268 RKAVLNLYKTLLYLGRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKE 441
           R  V++LYK L YLGR++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE
Sbjct: 5   RSKVISLYKHLQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKE 64

Query: 442 IEALYKLKKYRAMKRRY-YDD 501
           +EALY LKKYR++K+RY Y+D
Sbjct: 65  VEALYSLKKYRSVKQRYSYND 85


>AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA
           protein.
          Length = 85

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
 Frame = +1

Query: 268 RKAVLNLYKTLLYLGRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKE 441
           R  V++LYK L YLGR++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE
Sbjct: 5   RSKVISLYKHLQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKE 64

Query: 442 IEALYKLKKYRAMKRRY-YDD 501
           +EALY LKKYR++K+RY Y+D
Sbjct: 65  VEALYSLKKYRSVKQRYSYND 85


>AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC,
           isoform C protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 289 YKTLLYLGRDWPQGFDLFRKRLH-KVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLK 465
           YK L +L  DWPQ F L +K L  +  + +      Q   +  +     +  ++ +Y L 
Sbjct: 40  YKVLRHLHNDWPQYFRLLKKDLGLEQIAVSQMLLTQQPTSVDFEESMGAMHRLQTVYNLD 99

Query: 466 KYRAMKRRYYDD 501
            Y AM   + DD
Sbjct: 100 SY-AMTEGFIDD 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,355,855
Number of Sequences: 53049
Number of extensions: 486018
Number of successful extensions: 1085
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)