Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2o22
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 185 2e-46
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 185 2e-46
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 185 2e-46
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 185 2e-46
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 185 2e-46
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 184 3e-46
BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein. 37 0.085
BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein. 37 0.085
AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304... 37 0.085
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 33 1.0
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 33 1.0
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 33 1.0
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 33 1.0
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 33 1.0
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 33 1.0
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 33 1.0
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 33 1.0
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 33 1.0
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 31 3.2
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 31 3.2
U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein. 30 7.3
BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroi... 30 7.3
BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroi... 30 7.3
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 185 bits (450), Expect = 2e-46
Identities = 92/182 (50%), Positives = 128/182 (70%)
Frame = +2
Query: 179 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 358
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 91
Query: 359 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 538
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 92 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 151
Query: 539 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI 718
++ +E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI
Sbjct: 152 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 204
Query: 719 YG 724
+G
Sbjct: 205 FG 206
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 185 bits (450), Expect = 2e-46
Identities = 92/182 (50%), Positives = 128/182 (70%)
Frame = +2
Query: 179 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 358
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 359 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 538
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 539 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI 718
++ +E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI
Sbjct: 154 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 206
Query: 719 YG 724
+G
Sbjct: 207 FG 208
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 185 bits (450), Expect = 2e-46
Identities = 92/182 (50%), Positives = 128/182 (70%)
Frame = +2
Query: 179 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 358
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 359 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 538
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 539 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI 718
++ +E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI
Sbjct: 154 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 206
Query: 719 YG 724
+G
Sbjct: 207 FG 208
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 185 bits (450), Expect = 2e-46
Identities = 92/182 (50%), Positives = 128/182 (70%)
Frame = +2
Query: 179 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 358
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 359 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 538
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 539 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI 718
++ +E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI
Sbjct: 154 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 206
Query: 719 YG 724
+G
Sbjct: 207 FG 208
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 185 bits (450), Expect = 2e-46
Identities = 92/182 (50%), Positives = 128/182 (70%)
Frame = +2
Query: 179 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 358
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 359 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 538
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 539 RICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI 718
++ +E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI
Sbjct: 154 QLSKEAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDI 206
Query: 719 YG 724
+G
Sbjct: 207 FG 208
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 184 bits (448), Expect = 3e-46
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +2
Query: 209 GTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQV 388
G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+
Sbjct: 5 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 64
Query: 389 LFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVER 568
LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE+
Sbjct: 65 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 124
Query: 569 FIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYG 724
FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G
Sbjct: 125 FIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFG 169
>BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein.
Length = 706
Score = 36.7 bits (81), Expect = 0.085
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 329 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 508
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 260 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 316
Query: 509 VHVDGVRRIARICREEGVERFIHLSYLNAEE 601
+ I+ +C+E G + FIHL +L +
Sbjct: 317 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 345
>BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein.
Length = 617
Score = 36.7 bits (81), Expect = 0.085
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 329 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 508
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 171 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 227
Query: 509 VHVDGVRRIARICREEGVERFIHLSYLNAEE 601
+ I+ +C+E G + FIHL +L +
Sbjct: 228 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 256
>AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304
protein.
Length = 659
Score = 36.7 bits (81), Expect = 0.085
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 329 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 508
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 213 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 269
Query: 509 VHVDGVRRIARICREEGVERFIHLSYLNAEE 601
+ I+ +C+E G + FIHL +L +
Sbjct: 270 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 298
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1563 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1617
Query: 719 YG 724
YG
Sbjct: 1618 YG 1619
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1535 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1589
Query: 719 YG 724
YG
Sbjct: 1590 YG 1591
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 719 YG 724
YG
Sbjct: 1619 YG 1620
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 719 YG 724
YG
Sbjct: 130 YG 131
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 75 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 129
Query: 719 YG 724
YG
Sbjct: 130 YG 131
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1543 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1597
Query: 719 YG 724
YG
Sbjct: 1598 YG 1599
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1521 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1575
Query: 719 YG 724
YG
Sbjct: 1576 YG 1577
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1564 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1618
Query: 719 YG 724
YG
Sbjct: 1619 YG 1620
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 542 ICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI- 718
ICR ++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I
Sbjct: 1575 ICR--AIQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKIN 1629
Query: 719 YG 724
YG
Sbjct: 1630 YG 1631
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 583 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 690
L K RTS S E+T C NK + GRV + G PN
Sbjct: 275 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 310
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 31.5 bits (68), Expect = 3.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 583 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 690
L K RTS S E+T C NK + GRV + G PN
Sbjct: 276 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 311
>U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein.
Length = 373
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 248 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 427
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 428 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 574
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
>BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 248 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 427
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 428 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 574
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
>BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 248 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 427
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 428 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 574
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,323,507
Number of Sequences: 237096
Number of extensions: 2201280
Number of successful extensions: 7171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7165
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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