Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2o18
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 32 0.38
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 32 0.38
Z68296-3|CAB54197.2| 223|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z70782-10|CAN86639.1| 456|Caenorhabditis elegans Hypothetical p... 29 3.5
Z70782-9|CAA94840.1| 453|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g... 29 4.6
U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g... 29 4.6
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 29 4.6
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 29 4.6
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 29 4.6
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 29 4.6
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 6.1
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 6.1
Z46267-5|CAA86423.1| 216|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine re... 28 8.1
AC006675-2|AAK84549.1| 333|Caenorhabditis elegans Serpentine re... 28 8.1
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 160 IDLTEEDEICLKINE---KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKLDNM 324
+ LT+ D+ L NE + NN++ +L + +L+NK+ I E R TI+ +C L+
Sbjct: 653 VQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVLNGE 712
Query: 325 SANIQ 339
+A I+
Sbjct: 713 TAEIK 717
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 160 IDLTEEDEICLKINE---KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKLDNM 324
+ LT+ D+ L NE + NN++ +L + +L+NK+ I E R TI+ +C L+
Sbjct: 609 VQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVLNGE 668
Query: 325 SANIQ 339
+A I+
Sbjct: 669 TAEIK 673
>Z68296-3|CAB54197.2| 223|Caenorhabditis elegans Hypothetical
protein C46C2.5 protein.
Length = 223
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 220 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKV 360
++ E+ET Q+ N +++LY++ S L ++S +I+SSN S +
Sbjct: 59 ELREIETLQNSKFNNVDVLYDKDLMKSLFGDLKSISLSIKSSNCSSM 105
>Z98877-1|CAB11569.2| 343|Caenorhabditis elegans Hypothetical
protein Y69H2.1 protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = -3
Query: 288 YPLV*YF*LVQEFILPCLQFSHLIIRTLFIDFQTNFIFFCKIDRIFN-----VVHTFRQL 124
YP V + L++ F+L C Q + LI + ID +F K ++FN V+ TF +L
Sbjct: 116 YPSVLHCSLLRHFVLACFQSAGLITVPIAID-HICLVFLKKKLKVFNLVVIQVIITFVEL 174
Query: 123 YFII 112
+F +
Sbjct: 175 FFTL 178
>Z70782-10|CAN86639.1| 456|Caenorhabditis elegans Hypothetical
protein R04B5.4b protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 LVQEFILPCLQ-FSHLIIRTLFIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVND 100
LV ++I C F L + I FQ F+FFC ++R F V + R ++ D
Sbjct: 247 LVADWIEWCFDDFGLLPVDQKTILFQNFFVFFCMLERAFMTVKSGRDGIVVMASKD 302
>Z70782-9|CAA94840.1| 453|Caenorhabditis elegans Hypothetical
protein R04B5.4a protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 LVQEFILPCLQ-FSHLIIRTLFIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVND 100
LV ++I C F L + I FQ F+FFC ++R F V + R ++ D
Sbjct: 247 LVADWIEWCFDDFGLLPVDQKTILFQNFFVFFCMLERAFMTVKSGRDGIVVMASKD 302
>U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform e protein.
Length = 324
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 81 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 139
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 140 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 181
>U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform c protein.
Length = 424
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 181 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 239
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 240 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 281
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 539 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 597
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 598 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 639
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 576 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 634
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 635 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 676
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 576 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 634
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 635 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 676
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 397 LSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIF 576
LSP+ P + + N ++ HS++ + + +FT K S + K NLR +
Sbjct: 539 LSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPKHSSS-KTNLRQLN 597
Query: 577 KAAADSELKLSALSTPILGNVNILR-YLSLAYPTIIPYDHNDHI 705
D E K PI ++ LR + LA T Y D +
Sbjct: 598 GREEDKEKK--RFLGPISRTLSYLRSKMDLALSTSSLYPSRDDV 639
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -3
Query: 219 IIRTLFIDFQTNFIFFCKI----DRIFNVVHTFRQLY 121
I+ +++ F F++FCKI IFN++ F QL+
Sbjct: 181 ILYSIYFGFLALFVYFCKIHHLFSSIFNLIVNFCQLF 217
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +1
Query: 148 IKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 303
++ ID+ ++E+ + +K N ++ELL+KL ++E K++ +
Sbjct: 231 VRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 282
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +1
Query: 148 IKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 303
++ ID+ ++E+ + +K N ++ELL+KL ++E K++ +
Sbjct: 293 VRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 344
>Z46267-5|CAA86423.1| 216|Caenorhabditis elegans Hypothetical
protein F49E2.4 protein.
Length = 216
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 204 FIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVN 103
F+D + FC I +F++ H Q++F VN
Sbjct: 81 FLDTAVGSLGFCPISSVFDMAHRIGQIHFYRGVN 114
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 197 IFKQISSSSVRSIGFLMWYIHFGNSILSSWSTILFITYIII 75
I + S R++ F++W I S+ SWST T ++I
Sbjct: 49 IGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVI 89
>AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein128 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 212 GPFSLIFKQISSSSVRSIGFLMWYIHFGNSILSSWSTILFITYIIIYQPYPRCYSVFFFV 33
G + ++FK + ++S+ M+ +HF +S+L L + Y+I P P + F
Sbjct: 33 GGYVILFK--TPQKMKSVKMSMFLLHFWSSLLDITICFLIVPYVIF--PIPGGIPLGFLS 88
Query: 32 LMG 24
+G
Sbjct: 89 FLG 91
>AC006675-2|AAK84549.1| 333|Caenorhabditis elegans Serpentine
receptor, class h protein34 protein.
Length = 333
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 185 ISSSSVRSIGFLMWYIHFG-NSILSSWSTILFITYIIIYQP 66
+ + S +S GFL W I+F + W F+ I+ +QP
Sbjct: 37 VLTKSPKSFGFLKWIIYFHCCCVTCEWLNNAFLIDIMTFQP 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,719
Number of Sequences: 27780
Number of extensions: 318049
Number of successful extensions: 1008
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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