Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2o08
         (529 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96059 Cluster: Moricin-2 precursor; n=7; Obtectomera|R...    91   1e-17
UniRef50_P83416 Cluster: Virescein; n=7; Obtectomera|Rep: Viresc...    44   0.003
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    32   7.1  
UniRef50_A7BNY7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  
UniRef50_A6PLY1 Cluster: Dihydrodipicolinate synthetase; n=1; Vi...    32   9.4  

>UniRef50_O96059 Cluster: Moricin-2 precursor; n=7; Obtectomera|Rep:
           Moricin-2 precursor - Bombyx mori (Silk moth)
          Length = 66

 Score = 91.1 bits (216), Expect = 1e-17
 Identities = 47/59 (79%), Positives = 47/59 (79%)
 Frame = +2

Query: 86  MNILKLFFVFIVAMSLVSCSTXXXXXXXXXXXXTVGKAVGKGLRAINIASTANDVFNFL 262
           MNILKLFFVFIVAMSLVSCST            TVGKAVGKGLRAINIASTANDVFNFL
Sbjct: 1   MNILKLFFVFIVAMSLVSCSTAAPAKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFL 59


>UniRef50_P83416 Cluster: Virescein; n=7; Obtectomera|Rep: Virescein
           - Heliothis virescens (Noctuid moth) (Owlet moth)
          Length = 41

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 18/23 (78%), Positives = 22/23 (95%)
 Frame = +2

Query: 191 GKAVGKGLRAINIASTANDVFNF 259
           GKA+GKGLRA+NIASTA+DV+ F
Sbjct: 12  GKAIGKGLRAVNIASTAHDVYTF 34


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 203 GKGLRAINIASTANDVFNF 259
           GKGLRAINIA T +DV +F
Sbjct: 191 GKGLRAINIAGTTHDVVSF 209


>UniRef50_A7BNY7 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 246

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 217 SHQYRQYSQRCFQFLETEEKKALRKEIE 300
           +HQY++YS++C  F  + + +A+RKEIE
Sbjct: 141 NHQYKKYSKQCPLFNLSGDIEAIRKEIE 168


>UniRef50_A6PLY1 Cluster: Dihydrodipicolinate synthetase; n=1;
           Victivallis vadensis ATCC BAA-548|Rep:
           Dihydrodipicolinate synthetase - Victivallis vadensis
           ATCC BAA-548
          Length = 284

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 328 PLVIYLIP-FTQFLFLMLSFLRFQEIENIVGCTGDIDGS*TFTDCLSYSLNGLDRYFCWS 152
           PL +Y +P  T+ +    + +R   +ENIVGC  D  G  TF   L   L   D +   +
Sbjct: 132 PLFLYNMPALTRVMLTPETVIRLASVENIVGCK-DSSGDLTFFGTLVRELGSRDDFTLLT 190

Query: 151 G 149
           G
Sbjct: 191 G 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,698,444
Number of Sequences: 1657284
Number of extensions: 7322643
Number of successful extensions: 17570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17569
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)