Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2o04
         (471 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   4.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.4  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 336 FCLILPRVASVPSPWKYTIWNKFQFVKKLHSR 241
           FCL   ++  +PS WKY    KF  + KL  +
Sbjct: 238 FCLTY-QLDVLPSVWKYISTPKFNRLMKLFDK 268


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 220  QNKRLSNNASLSGNTESSETK*LILHLQN*SGIS 119
            +NK++ NN+ + GN+ S+     + H  N  G+S
Sbjct: 1151 KNKQIMNNSKVIGNSISNHQDNKLDHELNHRGVS 1184


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 216 IKDYPIMLLCRETPNHLRLN 157
           +  Y + + C ET  HL +N
Sbjct: 277 LNQYKMQIFCNETQAHLEMN 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,739
Number of Sequences: 2352
Number of extensions: 8085
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)