Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2o04
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016084-1|AAV36969.1|  359|Drosophila melanogaster LD45683p pro...    27   9.7  
AY122167-1|AAM52679.1|  361|Drosophila melanogaster LD24586p pro...    27   9.7  

>BT016084-1|AAV36969.1|  359|Drosophila melanogaster LD45683p
           protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 411 VNAILYLHTKFIIMTRRI*KKKQQPFCLILPRVASVPSPWKYTIWNKFQFVKKLHSRRR 235
           VNAI  L T+ +     I  K  +P   +LPR+   P P   T W KF   K +  +++
Sbjct: 79  VNAIWELPTERV--DESIVAKLPEP-TTVLPRLRKPPGPRPLTKWEKFAKEKGISKKKK 134


>AY122167-1|AAM52679.1|  361|Drosophila melanogaster LD24586p
           protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 411 VNAILYLHTKFIIMTRRI*KKKQQPFCLILPRVASVPSPWKYTIWNKFQFVKKLHSRRR 235
           VNAI  L T+ +     I  K  +P   +LPR+   P P   T W KF   K +  +++
Sbjct: 81  VNAIWELPTERV--DESIVAKLPEP-TTVLPRLRKPPGPRPLTKWEKFAKEKGISKKKK 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,606,046
Number of Sequences: 53049
Number of extensions: 330291
Number of successful extensions: 585
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)