Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2n13
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.      75   2e-13
BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.      73   5e-13
BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.      67   4e-11
CR533542-1|CAG38573.1|  359|Homo sapiens DKFZP434G072 protein.         29   9.8  
BC074759-1|AAH74759.1|  359|Homo sapiens chromosome 4 open readi...    29   9.8  
AK223345-1|BAD97065.1|  359|Homo sapiens chromosome 4 open readi...    29   9.8  

>BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 36/109 (33%), Positives = 57/109 (52%)
 Frame = +3

Query: 186 APXGKPPTEGSKQXLXXNAATVKFYRXMSMAATSFYGXITAXFYYENISNWVXFFXVXVL 365
           AP GK  T G KQ    N  T+KFY  + + A + Y  +T  F+Y + S W        L
Sbjct: 2   APKGKVGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSL 61

Query: 366 IXHIACYQLMMYISKPRYLXNTQLLDPGLDXNMEGGMGEXXQDIVILSS 512
             + A Y  M  +++  +  +  L+D G+D NME GM E  +D+++L++
Sbjct: 62  AVYGASYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTA 110


>BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score = 73.3 bits (172), Expect = 5e-13
 Identities = 36/109 (33%), Positives = 56/109 (51%)
 Frame = +3

Query: 186 APXGKPPTEGSKQXLXXNAATVKFYRXMSMAATSFYGXITAXFYYENISNWVXFFXVXVL 365
           AP GK  T G KQ    N  T+KFY  + + A + Y  +T  F+Y + S W        L
Sbjct: 2   APKGKVGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSL 61

Query: 366 IXHIACYQLMMYISKPRYLXNTQLLDPGLDXNMEGGMGEXXQDIVILSS 512
             + A Y  M  +++  +     L+D G+D NME GM E  +D+++L++
Sbjct: 62  AVYGASYHSMSSMARAAFSEYGALMDGGMDLNMEQGMAEHLKDVILLTA 110


>BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.
          Length = 100

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 34/99 (34%), Positives = 49/99 (49%)
 Frame = +3

Query: 186 APXGKPPTEGSKQXLXXNAATVKFYRXMSMAATSFYGXITAXFYYENISNWVXFFXVXVL 365
           AP GK  T G KQ    N  T+KFY  + + A + Y  +T  F+Y + S W        L
Sbjct: 2   APKGKVGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSL 61

Query: 366 IXHIACYQLMMYISKPRYLXNTQLLDPGLDXNMEGGMGE 482
             + A Y  M  +++  +  +  L+D G+D NME GM E
Sbjct: 62  AVYGASYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAE 100


>CR533542-1|CAG38573.1|  359|Homo sapiens DKFZP434G072 protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 141 INILVHCAXNSSMAP-APXGKPPT 209
           IN+L H   N+SM P A  GKPPT
Sbjct: 225 INLLTHHRRNTSMEPAAETGKPPT 248


>BC074759-1|AAH74759.1|  359|Homo sapiens chromosome 4 open reading
           frame 17 protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 141 INILVHCAXNSSMAP-APXGKPPT 209
           IN+L H   N+SM P A  GKPPT
Sbjct: 225 INLLTHHRRNTSMEPAAETGKPPT 248


>AK223345-1|BAD97065.1|  359|Homo sapiens chromosome 4 open reading
           frame 17 variant protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 141 INILVHCAXNSSMAP-APXGKPPT 209
           IN+L H   N+SM P A  GKPPT
Sbjct: 225 INLLTHHRRNTSMEPAAETGKPPT 248


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,338,817
Number of Sequences: 237096
Number of extensions: 1033112
Number of successful extensions: 1192
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)