Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2n13
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p pro...    74   1e-13
AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA...    74   1e-13

>AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p
           protein.
          Length = 174

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 39/114 (34%), Positives = 62/114 (54%)
 Frame = +3

Query: 177 MAPAPXGKPPTEGSKQXLXXNAATVKFYRXMSMAATSFYGXITAXFYYENISNWVXFFXV 356
           MAP   GK  T+G+KQ +  N  T+ FYR M++   +    +   F    ++    F  +
Sbjct: 1   MAPQQKGKQGTKGAKQIVEENKTTLTFYRNMAIGCAA--PALLLSFLVFEVTKTSVFMHI 58

Query: 357 XVLIXHIACYQLMMYISKPRYLXNTQLLDPGLDXNMEGGMGEXXQDIVILSSXT 518
             L+   + YQ M ++S+ +Y  +  LLD G D NMEGG+ E  +D++IL+S T
Sbjct: 59  LSLLILGSSYQFMAFMSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGT 112


>AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA
           protein.
          Length = 174

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 39/114 (34%), Positives = 62/114 (54%)
 Frame = +3

Query: 177 MAPAPXGKPPTEGSKQXLXXNAATVKFYRXMSMAATSFYGXITAXFYYENISNWVXFFXV 356
           MAP   GK  T+G+KQ +  N  T+ FYR M++   +    +   F    ++    F  +
Sbjct: 1   MAPQQKGKQGTKGAKQIVEENKTTLTFYRNMAIGCAA--PALLLSFLVFEVTKTSVFMHI 58

Query: 357 XVLIXHIACYQLMMYISKPRYLXNTQLLDPGLDXNMEGGMGEXXQDIVILSSXT 518
             L+   + YQ M ++S+ +Y  +  LLD G D NMEGG+ E  +D++IL+S T
Sbjct: 59  LSLLILGSSYQFMAFMSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGT 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,268
Number of Sequences: 53049
Number of extensions: 283662
Number of successful extensions: 379
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)