Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2n03
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.99
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 1.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 7.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 7.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 7.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 7.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 7.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 7.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 7.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.2
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.2
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 24.6 bits (51), Expect = 0.99
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -2
Query: 124 WPQCEREWETHKCTLFSNENNLQCFQQ 44
W C W T C + ++L C+ Q
Sbjct: 98 WGSCNNYWNTKNCVNPYDRDSLSCWLQ 124
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 21 DDRTTYSGCWKHCKLFS 71
D + TYSG W+ C S
Sbjct: 95 DSKVTYSGLWRVCVAIS 111
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 299 TPFINT-KKIFRKN*IVVMFFFIRIKVFHY 213
TP N+ KI R + IV FF+ I VF++
Sbjct: 414 TPRYNSVSKIDRASRIVFPLFFLAINVFYW 443
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/19 (42%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +3
Query: 225 FNANKKE-HYNNLILPEYF 278
F +N+KE H++N+I+P +
Sbjct: 121 FFSNEKEGHFHNIIMPNVY 139
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/19 (42%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +3
Query: 225 FNANKKE-HYNNLILPEYF 278
F +N+KE H++N+I+P +
Sbjct: 121 FFSNEKEGHFHNIIMPNVY 139
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 214 QHTSSRYSRERSCSRDRNREYRKKDRQ 240
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 214 QHTSSRYSRERSCSRDRNREYRKKDRQ 240
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 214 QHTSSRYSRERSCSRDRNREYRKKDRQ 240
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRKKDRQ 251
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 214 QHTSSRYSRERSCSRDRNREYRKKDRQ 240
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 468 PSPRALSSVQHQLHTK 515
PSP L+S HQ H K
Sbjct: 44 PSPSLLTSQPHQDHNK 59
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N K DR+
Sbjct: 214 QHTSSRYSRERSCSRDRNREYKEKDRR 240
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N + DRQ
Sbjct: 225 QHTSSRYSRERRCSRDRNREYRKKDRQ 251
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N K DR+
Sbjct: 225 QHTSSRYSRERSCSRDRNREYKEKDRR 251
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N K DR+
Sbjct: 225 QHTSSRYSRERSCSRDRNREYKKKDRR 251
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 99 RHTSALYSRTKIICNVSNSPNKSYDRQ 19
+HTS+ YSR + N K DR+
Sbjct: 225 QHTSSRYSRERSCSRDRNREYKEKDRR 251
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,619
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 30
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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