Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2m19
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC151235-1|AAI51236.1| 718|Homo sapiens ATP-binding cassette, s... 62 2e-09
BC141836-1|AAI41837.1| 693|Homo sapiens ABCB8 protein protein. 62 2e-09
BC141814-1|AAI41815.1| 718|Homo sapiens ATP-binding cassette, s... 62 2e-09
AK222911-1|BAD96631.1| 718|Homo sapiens ATP-binding cassette, s... 62 2e-09
AK128129-1|BAC87287.1| 467|Homo sapiens . protein. 62 2e-09
AK094636-1|BAC04392.1| 701|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AK002018-1|BAA92038.1| 735|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AF047690-1|AAD15748.1| 718|Homo sapiens ATP-binding cassette pr... 62 2e-09
BC064930-1|AAH64930.1| 738|Homo sapiens ATP-binding cassette, s... 36 0.11
AL121990-4|CAI22012.1| 738|Homo sapiens ATP-binding cassette, s... 36 0.11
AF216833-1|AAF78198.1| 738|Homo sapiens M-ABC2 protein protein. 36 0.11
AB013380-1|BAB20265.1| 737|Homo sapiens mono ATP-binding casset... 36 0.11
BC071952-1|AAH71952.1| 254|Homo sapiens NIP30 protein protein. 30 7.0
BC020536-1|AAH20536.1| 254|Homo sapiens NEFA-interacting nuclea... 30 7.0
AK025452-1|BAB15136.1| 254|Homo sapiens protein ( Homo sapiens ... 30 7.0
AK023291-1|BAB14512.1| 254|Homo sapiens protein ( Homo sapiens ... 30 7.0
AF356585-1|AAK43697.1| 254|Homo sapiens NEFA-interacting nuclea... 30 7.0
AF271785-1|AAG44796.1| 254|Homo sapiens CDA018 protein. 30 7.0
AF212249-1|AAK14932.1| 254|Homo sapiens CDA10 protein. 30 7.0
>BC151235-1|AAI51236.1| 718|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 8 protein.
Length = 718
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 113 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 172
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 173 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 203
>BC141836-1|AAI41837.1| 693|Homo sapiens ABCB8 protein protein.
Length = 693
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 113 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 172
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 173 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 203
>BC141814-1|AAI41815.1| 718|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 8 protein.
Length = 718
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 113 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 172
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 173 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 203
>AK222911-1|BAD96631.1| 718|Homo sapiens ATP-binding cassette,
sub-family B, member 8 variant protein.
Length = 718
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 113 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 172
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 173 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 203
>AK128129-1|BAC87287.1| 467|Homo sapiens . protein.
Length = 467
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 150 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 209
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 210 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 240
>AK094636-1|BAC04392.1| 701|Homo sapiens protein ( Homo sapiens
cDNA FLJ37317 fis, clone BRAMY2017455, highly similar to
Homo sapiens ATP-binding cassette protein M-ABC1 mRNA.
).
Length = 701
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 96 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 155
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 156 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 186
>AK002018-1|BAA92038.1| 735|Homo sapiens protein ( Homo sapiens
cDNA FLJ11156 fis, clone PLACE1006956, weakly similar to
ATP-DEPENDENT PERMEASE MDL1. ).
Length = 735
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 130 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVEVVAKYTRDHVGSFMT 189
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 190 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 220
>AF047690-1|AAD15748.1| 718|Homo sapiens ATP-binding cassette
protein M-ABC1 protein.
Length = 718
Score = 61.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +2
Query: 434 AKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFID 613
++F+W+ +L PH +L AV AL A +NV IP +LG +V V+A + F+
Sbjct: 113 SRFNWKLFWQFLHPHLLVLGVAVVLALGAALVNVQIPLLLGQLVKVVAKYTRDHVGSFMT 172
Query: 614 EIKMPAFKLISLYVGQAAFTFFYIHLLSQVG 706
E + + L+ LY Q TF Y+ LLS VG
Sbjct: 173 ESQNLSTHLLILYGVQGLLTFGYLVLLSHVG 203
>BC064930-1|AAH64930.1| 738|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 10 protein.
Length = 738
Score = 36.3 bits (80), Expect = 0.11
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 452 KLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPA 631
KLL P + L AAVG + +++ P LG I++V I NP D+ D +
Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDV---IYTNPTVDYSDNLTRLC 215
Query: 632 FKLISLYVGQAAFTFFYIHLLSQVG 706
L ++++ AA ++L+ G
Sbjct: 216 LGLSAVFLCGAAANAIRVYLMQTSG 240
>AL121990-4|CAI22012.1| 738|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 10 protein.
Length = 738
Score = 36.3 bits (80), Expect = 0.11
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 452 KLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPA 631
KLL P + L AAVG + +++ P LG I++V I NP D+ D +
Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDV---IYTNPTVDYSDNLTRLC 215
Query: 632 FKLISLYVGQAAFTFFYIHLLSQVG 706
L ++++ AA ++L+ G
Sbjct: 216 LGLSAVFLCGAAANAIRVYLMQTSG 240
>AF216833-1|AAF78198.1| 738|Homo sapiens M-ABC2 protein protein.
Length = 738
Score = 36.3 bits (80), Expect = 0.11
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 452 KLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPA 631
KLL P + L AAVG + +++ P LG I++V I NP D+ D +
Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDV---IYTNPTVDYSDNLTRLC 215
Query: 632 FKLISLYVGQAAFTFFYIHLLSQVG 706
L ++++ AA ++L+ G
Sbjct: 216 LGLSAVFLCGAAANAIRVYLMQTSG 240
>AB013380-1|BAB20265.1| 737|Homo sapiens mono ATP-binding cassette
protein protein.
Length = 737
Score = 36.3 bits (80), Expect = 0.11
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 452 KLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPA 631
KLL P + L AAVG + +++ P LG I++V I NP D+ D +
Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDV---IYTNPTVDYSDNLTRLC 215
Query: 632 FKLISLYVGQAAFTFFYIHLLSQVG 706
L ++++ AA ++L+ G
Sbjct: 216 LGLSAVFLCGAAANAIRVYLMQTSG 240
>BC071952-1|AAH71952.1| 254|Homo sapiens NIP30 protein protein.
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>BC020536-1|AAH20536.1| 254|Homo sapiens NEFA-interacting nuclear
protein NIP30 protein.
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>AK025452-1|BAB15136.1| 254|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21799 fis, clone HEP00611. ).
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>AK023291-1|BAB14512.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13229 fis, clone OVARC1000106. ).
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>AF356585-1|AAK43697.1| 254|Homo sapiens NEFA-interacting nuclear
protein NIP30 protein.
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>AF271785-1|AAG44796.1| 254|Homo sapiens CDA018 protein.
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
>AF212249-1|AAK14932.1| 254|Homo sapiens CDA10 protein.
Length = 254
Score = 30.3 bits (65), Expect = 7.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 KSNKYFTNIVKNKPS---DALNRYISQLKTRGKSSKSGESLPCSPWKLCTGVSLAIGA 343
KS++ ++ + KP D N+ S K+ G +S SG S+ C +C G+ +GA
Sbjct: 160 KSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGA 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,530,183
Number of Sequences: 237096
Number of extensions: 1769640
Number of successful extensions: 7662
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7662
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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