Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m18
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine re...    31   0.87 
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    30   2.0  
AF024494-12|AAB70332.3|  332|Caenorhabditis elegans Serpentine r...    29   3.5  
Z81073-4|CAD56580.1|  288|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81073-3|CAC42296.1|  288|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z75554-2|CAA99954.1|  526|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    28   8.1  
L23651-13|AAA27957.3|  251|Caenorhabditis elegans Hypothetical p...    28   8.1  
AF026211-2|AAB71294.1|  440|Caenorhabditis elegans Hypothetical ...    28   8.1  

>AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine
           receptor, class u protein27 protein.
          Length = 336

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/55 (20%), Positives = 28/55 (50%)
 Frame = -1

Query: 489 FLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILTSRVEKYPIPY 325
           F +I + + T ++ +    +++RL    + T W A++  N +++   +  Y + Y
Sbjct: 70  FTAISISQLTCVLFFIFDFVYIRLMTTGMFTSWCASVSPNHYLMVLYISTYYVNY 124


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
           N   +SLK N+E       L+    NC  +     DCC Y  VN  +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
           N   +SLK N+E       L+    NC  +     DCC Y  VN  +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
           N   +SLK N+E       L+    NC  +     DCC Y  VN  +T+
Sbjct: 266 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 313


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
           N   +SLK N+E       L+    NC  +     DCC Y  VN  +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415


>AF024494-12|AAB70332.3|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein28 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = -1

Query: 489 FLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILTSRVEKYPIPY 325
           F +I + ++T ++ +    + +RL    + T W A+   N +I+   +  Y + Y
Sbjct: 72  FTAICISQFTCLLFFIFDFVHIRLMTTGIFTSWCASSAPNHYIMALYIATYYVNY 126


>Z81073-4|CAD56580.1|  288|Caenorhabditis elegans Hypothetical
           protein F30F8.9b protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 544 LSPYHNLPKTDANRVTPKFSLDSSSTIYVHS 452
           L  Y N   TD N++ P   LDSS  + VH+
Sbjct: 170 LKTYGNPSSTDENKMKPLDKLDSSEMLLVHN 200


>Z81073-3|CAC42296.1|  288|Caenorhabditis elegans Hypothetical
           protein F30F8.9a protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 544 LSPYHNLPKTDANRVTPKFSLDSSSTIYVHS 452
           L  Y N   TD N++ P   LDSS  + VH+
Sbjct: 170 LKTYGNPSSTDENKMKPLDKLDSSEMLLVHN 200


>U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical
           protein B0244.6 protein.
          Length = 982

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 628 YSVLLSVIGAAVLFIVNVVHNIYF 699
           YS+  S IG AVL  + V+H +YF
Sbjct: 734 YSLQGSYIGMAVLLYIGVIHPVYF 757


>Z75554-2|CAA99954.1|  526|Caenorhabditis elegans Hypothetical
           protein ZC455.3 protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 277 SHAASTIESSTPRVLSVRNRVFFYSRR*NKSIVINGSMPFCQNTGFLESYKNMP 438
           S   +T++    ++LS+RN     S     +++ +  MP    TG +E+++ MP
Sbjct: 275 SFKTTTLDEEFNKILSLRNNTILVSFG---TVIQSSDMPDDFKTGLIEAFRRMP 325


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 118  QQYAAKSRGSSHVSKKQASVVAPHSFRWSEENRG 219
            Q+   +SRGS  +S+ ++ VV    +RW +++ G
Sbjct: 1471 QRSRHRSRGSYKISESKSKVVRGKDWRWEDQDGG 1504


>L23651-13|AAA27957.3|  251|Caenorhabditis elegans Hypothetical
           protein C29E4.8 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 621 ITYSLIDYYRHR*VHITIVTA--IFNKTYHHTTIYRKLTQIE*RRSFL 484
           +T  L+DYY+   VH+ +  A  + +   H   ++ K TQ + R SF+
Sbjct: 204 MTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVFAKFTQKKERVSFV 251


>AF026211-2|AAB71294.1|  440|Caenorhabditis elegans Hypothetical
           protein T13B5.3 protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = -1

Query: 540 HHTTIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFI 361
           H TT+Y  LT        +   +  YT  V    W++       RVL  +H+A ++N  +
Sbjct: 329 HDTTVYAFLTTFGDEERVIEGGMPHYTASVAVELWNLKNGGPSVRVL--FHSAFHHNYHV 386

Query: 360 LTSRVEKYP 334
           +T   +  P
Sbjct: 387 ITHLAKGCP 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,399,756
Number of Sequences: 27780
Number of extensions: 345786
Number of successful extensions: 970
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)