Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2m15
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondr... 114 3e-25
BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondr... 114 3e-25
BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondr... 114 3e-25
AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondr... 114 3e-25
AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondr... 114 3e-25
AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens ... 114 3e-25
AL139344-2|CAI19843.1| 273|Homo sapiens transmembrane epididyma... 31 5.5
AJ515384-1|CAD56348.2| 273|Homo sapiens transmembrane epididyma... 31 5.5
>BC071731-1|AAH71731.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>BC018781-1|AAH18781.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>BC008498-1|AAH08498.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>AL593856-2|CAI16978.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>AL136373-1|CAI14761.1| 328|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 1 protein.
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>AK026004-1|BAB15316.1| 328|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22351 fis, clone HRC06325. ).
Length = 328
Score = 114 bits (275), Expect = 3e-25
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 140 LKTNPYYEKYANRIAELQNTSPEEFMERVEQCDXXXXXXXXXXFASVDTRQFSSVLNPKQ 319
L+ NP+Y++Y ++I L+ + P F R+E+ S V
Sbjct: 71 LQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGH---SRQGDFIKCVEQKTD 127
Query: 320 ALGKE-IN---VPDKKLEDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNI 487
ALGK+ +N DK L IF IE+V +K++ EIK IW++Y K+ + A IP + + I
Sbjct: 128 ALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLI 187
Query: 488 KETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQVHKENAPECLTMVHYTEL- 664
P FL LPR +GYEF + Q G +HFT L+ Q E A L + HY EL
Sbjct: 188 WNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELK 247
Query: 665 SDKGIILMRGEYD 703
+KGI+LM E D
Sbjct: 248 EEKGIVLMTAEMD 260
>AL139344-2|CAI19843.1| 273|Homo sapiens transmembrane epididymal
protein 1 protein.
Length = 273
Score = 30.7 bits (66), Expect = 5.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 514 VPVSSSTLTGL*VYHVPDVWTHCSFYSIISLSGPQRKCTRMSNHGPLYR 660
V +++S L G +Y W HC F + L+GP+ S GPLY+
Sbjct: 206 VMINASFLLG--IYGFSSFWYHC-FRPSLKLTGPKEAPYYASTPGPLYK 251
>AJ515384-1|CAD56348.2| 273|Homo sapiens transmembrane epididymal
protein 1 protein.
Length = 273
Score = 30.7 bits (66), Expect = 5.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 514 VPVSSSTLTGL*VYHVPDVWTHCSFYSIISLSGPQRKCTRMSNHGPLYR 660
V +++S L G +Y W HC F + L+GP+ S GPLY+
Sbjct: 206 VMINASFLLG--IYGFSSFWYHC-FRPSLKLTGPKEAPYYASTPGPLYK 251
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,987,728
Number of Sequences: 237096
Number of extensions: 2168667
Number of successful extensions: 11786
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11780
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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