Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2m15
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-2|AAK52183.2| 526|Caenorhabditis elegans Udp-glucuronosy... 31 0.63
U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine rece... 31 1.1
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical ... 31 1.1
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 30 1.9
AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine re... 29 4.4
L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81084-4|CAB03109.2| 476|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U55369-2|AAK52183.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein48 protein.
Length = 526
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 122 EKALENLKTNPYYEKYANRIAELQNTSPEEFMERV 226
E A++ + NP Y++ ANR+ +L + P+ ER+
Sbjct: 427 EGAIKEILVNPTYQEKANRLKKLMRSKPQSASERL 461
>U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine
receptor, class w protein123 protein.
Length = 365
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +2
Query: 386 IDKSSTEIKSIWEE-YHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRSQGYEFIMC 562
I KS+ + +E+ ++Q + + A + S+I + HF + R+ +M
Sbjct: 16 IQKSTAKSLCKFEKTFYQFSDKLLAHVNEISISSILINLVHFFILTRKPMRTSSINILMA 75
Query: 563 QMYGHTVHFTPLLAYQV----HKENAPECLTMVHYTELSDKGIILMRGEYDKKCTEW 721
+ + FT LL +V +K+ ECL++ Y + K ++ + +Y ++C+ W
Sbjct: 76 AVAFFDI-FTSLLPIEVLFERYKDIFFECLSLDTYGLVLTKALLTVVKDYSRRCSTW 131
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 377 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 520
EL + KSS+E K E +N +E I+ +P+D+ + + M + P+F+
Sbjct: 548 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 598
>AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical
protein Y58A7A.3 protein.
Length = 883
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 377 ELVIDKSSTEIKSIWEEYHQN---KEVISATIPVDVYSNIKETMNHFPVFL 520
EL + KSS+E K E +N +E I+ +P+D+ + + M + P+F+
Sbjct: 529 ELFLIKSSSETKIKCTECLRNEFYREFIARRLPIDLQTETADEMEYLPIFI 579
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +2
Query: 122 EKALENLKTNPYYEKYANRIAEL---QNTSPEE-FMERVE 229
+ +E + NP Y K A R+AE+ Q T+P+E F++ VE
Sbjct: 426 QSTIEEVLNNPEYRKSAERVAEMLRNQPTNPKETFLKYVE 465
>AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine
receptor, class w protein122 protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 479 SNIKETMNHFPVFLFPLPRSQGYEFIMCQMYGHTVHFTPLLAYQV----HKENAPECLTM 646
S+I + HF + R+ +M + + FT LL +V +K+ ECL++
Sbjct: 48 SSILINLVHFFILTRKPMRTSSINILMAAVAFFDI-FTSLLPIEVLFERYKDIFFECLSL 106
Query: 647 VHYTELSDKGIILMRGEYDKKCTEW 721
Y + K ++ + +Y ++C+ W
Sbjct: 107 DTYGLVLTKALLTVVKDYSRRCSTW 131
>L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical
protein ZC262.3b protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 371 KIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFLFPLPRS 538
++E + +K + ++ + + YHQ E + + Y++ +E +NHF +P+S
Sbjct: 550 QMESLHEKYTKRVQIVRDNYHQQVEALRVS-----YASQQEKLNHFVCLSITIPKS 600
>Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical
protein T03E6.6 protein.
Length = 372
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 169 IFLIVGISFQILKCLLHSHR 110
IF +VG++ +L CL+ SHR
Sbjct: 57 IFCVVGLNINLLNCLVISHR 76
>Z81084-4|CAB03109.2| 476|Caenorhabditis elegans Hypothetical
protein F46A9.3a protein.
Length = 476
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 359 EDIFKIELVIDKSSTEIKSIWEEYHQNKEVISATIPVDVYSNIKETMNHFPVFL 520
EDI K L D +S SIWE N+ I+ + V+ I T+ F +FL
Sbjct: 19 EDILKAFLEEDFNSQHYDSIWECLQHNRRAIAVNGFIIVFLIIYTTIGGF-IFL 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,472,518
Number of Sequences: 27780
Number of extensions: 357354
Number of successful extensions: 994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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